Man pages for gk-crop/sunscanimport
Imports data from sunscan device

addPlotIDAdds PlotID column to LAI data
addPlotIDFromDataAdds PlotID column to LAI data
convertSunScanDirectoryConverts all SunScan data files in a directory (and it's...
convertSunscanFileConverts a SunScan data file
countMeasurementsCounts measurements
createBoxplotCreates a boxplot for LAI data
createFoldersCreates (sub)folders for converted data and reports
createGridPlotPlots the PlotNr arranged in a grid
createGridPlotLAIPlots LAI on a grid
createSeriesInfoSummarise information about measurement series
createSummarySummarises data for each PlotID
createTimePlotPlots measurements over time
createTimePlotLAIPlots measurements over time
generateInitialGridDataCreates initial grid data
generateReportGenerates report concerning converted data
generateSampleMeasurementIdDataCreates Sample MeasurementID data
generateSamplePlotIdDataGenerates sample ID data
getDataExtracts LAI data from the file lines
getFileListFetches recursively all possible data files from a directory
getHeaderGets meta data from the file header
getParDataExtracts PAR data from the file lines
getSmallHeaderGets meta data from the file header
headerFileNameFile name for the metadata file
isDataLineChecks if the line is a data line
isMovedFileChecks if the data file has been moved to subfolder...
isSunscanFileChecks if given file is a valid SunScan file
isTitleLineChecks if the line is a title line
movedFileNameReturns path for the data file moved to 'original' subfolder
moveFilesToSubfoldersMoves data file to subfolder 'original'
moveOriginalFileMoves data file to subfolder 'original'
readConvertedHeaderReads converted data
readIdDataRead dataframe with PlotID column
reorderDataColumnsReorders columns in converted data
runSunscanAppRuns Shiny app
saveHeaderSaves metadata to file
splitLinesSplits the data when file contains multiple headers
stripFileExtensionStrips the file extension
sunscanimportFunctions to import, convert and visualise data from LAI...
transformToWideFormatTransform LAI data to wide format (1 row per PlotID)
gk-crop/sunscanimport documentation built on Feb. 8, 2025, 3:15 p.m.