API for grimbough/arrayQualityMetrics
Quality metrics report for microarray data sets
| Global functions | |
|---|---|
| addXYfromGAL | Man page Source code |
| addXYfromGAL-methods | Man page |
| annotationTable | Source code |
| applyDyeSwap | Source code |
| aqm.boxplot | Man page Source code |
| aqm.density | Man page Source code |
| aqm.heatmap | Man page Source code |
| aqm.maplot | Man page Source code |
| aqm.meansd | Man page Source code |
| aqm.nuse | Man page Source code |
| aqm.outliers | Source code |
| aqm.pca | Man page Source code |
| aqm.pmmm | Man page Source code |
| aqm.probesmap | Man page Source code |
| aqm.qcstats | Man page |
| aqm.rle | Man page Source code |
| aqm.rnadeg | Man page Source code |
| aqm.spatial | Man page Source code |
| aqm.writereport | Man page Source code |
| aqmReportModule | Man page |
| aqmReportModule-class | Man page |
| arrayQualityMetrics | Man page Source code |
| boxplotOutliers | Man page |
| class:aqmReportModule | Man page |
| class:outlierDetection | Man page |
| cleanPhenoData | Source code |
| dens | Source code |
| dircreation | Source code |
| figurePhrase | Source code |
| intgroupColors | Source code |
| introductoryNote | Source code |
| logtransform | Source code |
| makeEnding | Source code |
| makeIndex | Source code |
| makePlot | Source code |
| makeSection | Source code |
| makeTitle | Source code |
| makeabscoord | Source code |
| makecoordblock | Source code |
| maximumLevels | Source code |
| namedEmptyList | Source code |
| oneColor | Source code |
| outlierDetection | Man page |
| outlierDetection-class | Man page |
| outliers | Man page Source code |
| prepaffy | Man page Source code |
| prepdata | Man page Source code |
| processMaxNumArrays | Source code |
| renameNodes | Source code |
| reportModule | Source code |
| reportTable | Source code |
| spatialplot | Source code |
| toJSON_fromchar | Source code |
| toJSON_frommatrix | Source code |
| toJSON_fromvector | Source code |
| toggleEnd | Source code |
| toggleStart | Source code |
