API for guillaumecharbonnier/greatr
GREATR: multi-samples analysis of cis-regulatory regions.
| Global functions | |
|---|---|
| add_custom_ontologies | Source code |
| add_metrics_to_enrichment_tables | Source code |
| add_similarity_filtered_ontologies | Source code |
| add_slim_ontologies | Source code |
| check_if_best_in_simgroup | Source code |
| collapse_samples | Source code |
| compute_additional_metrics | Source code |
| convert_collapse_formula_to_yaml | Source code |
| load_beds | Source code |
| make_great_heatmap | Source code |
| make_preset_heatmaps | Source code |
| merge_replicates | Source code |
| pass_tests | Source code |
| plot_all_heatmaps | Source code |
| plot_facet_heatmaps | Source code |
| plot_facet_heatmaps2 | Source code |
| plot_heatmap | Source code |
| plot_melted_data | Source code |
| plot_melted_data2 | Source code |
| prepare_data_for_all_heatmaps | Source code |
| prepare_data_for_heatmap | Source code Source code |
| prepare_data_for_heatmap2 | Source code |
| query_great | Source code |
| run_pipeline | Source code |
| subsample_beds | Source code |
| subset_data_for_heatmap | Source code |
