API for haizi-zh/bedtorch
R package for fast BED-file manipulation
| Global functions | |
|---|---|
| .available_colname | Source code |
| as.GenomicRanges | Man page Source code |
| as.GenomicRanges.GRanges | Source code |
| as.GenomicRanges.data.frame | Source code |
| as.bedtorch_table | Man page Source code |
| as.bedtorch_table.GRanges | Source code |
| as.bedtorch_table.bedtorch_table | Source code |
| as.bedtorch_table.data.frame | Source code |
| bedtorch_table | Source code |
| bgzip | Source code |
| build_tabix_index | Source code |
| c_read_tabix_table | Source code |
| c_rollmean | Source code |
| c_rollsum | Source code |
| cluster_bed | Man page |
| complement_bed | Man page Source code |
| complement_bed.GRanges | Source code |
| complement_bed.bedtorch_table | Source code |
| exclude_bed | Man page Source code |
| exclude_bed.GRanges | Source code |
| exclude_bed.bedtorch_table | Source code |
| hs_seqinfo | Man page |
| intersect_bed | Man page Source code |
| intersect_bed.GRanges | Source code |
| intersect_bed.bedtorch_table | Source code |
| intersect_bed_default | Source code |
| intersect_bed_unique | Source code |
| isTabixRange | Source code |
| is_gzip | Source code |
| is_remote | Source code |
| jaccard_bed | Man page |
| load_chrom_sizes | Source code |
| make_random_bed | Man page |
| make_windows | Man page |
| map_bed | Man page Source code |
| map_bed.GRanges | Source code |
| map_bed.bedtorch_table | Source code |
| merge_bed | Man page Source code |
| merge_bed.GRanges | Source code |
| merge_bed.bedtorch_table | Source code |
| min_overlap_filter | Source code |
| new_bedtorch_table | Source code |
| normalize_tabix_range | Source code |
| overlapping_intervals | Source code |
| print.bedtorch_table | Source code |
| read_bed | Man page |
| read_metadata | Man page |
| reldist_bed | Man page |
| rollmean | Man page Source code |
| rollsum | Man page Source code |
| shuffle_bed | Man page |
| slop_bed | Man page Source code |
| slop_bed.GRanges | Source code |
| slop_bed.bedtorch_table | Source code |
| subtract_bed | Man page Source code |
| subtract_bed.GRanges | Source code |
| subtract_bed.bedtorch_table | Source code |
| validate_bedtorch_table | Source code |
| write_bed | Man page |
