hk1785/MiHC: Microbiome Higher Criticism Analysis

This R package provides facilities for the microbiome higher criticism analysis (MiHC) which tests the association between a microbial group (e.g., community or clade) composition and a host phenotype of interest. MiHC is a data-driven omnibus test taken in a search space spanned by tailoring the higher criticism test to incorporate phylogenetic information and/or modulate sparsity levels and including the Simes test for excessively high sparsity levels.

Getting started

Package details

AuthorHyunwook Koh
MaintainerHyunwook Koh <hkoh7@jhu.edu>
LicenseGPL-2
Version1.0
URL https://github.com/hk1785/MiHC
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("hk1785/MiHC")
hk1785/MiHC documentation built on Dec. 21, 2024, 4:29 a.m.