Man pages for holaanna/contactsimulator
Contact model simulator
| circle_line_intersections | Generates a set of intersection points between the cirlce and... |
| Conf_Band | Visualisation of the crdible band |
| contact | Constructor of the basic contact object |
| contact_fun | A class for functions that may be defined in R, using... |
| contactsimulator-package | Inference for spatio-temporal contact type models |
| contat_class | An S4 class to represent a contact model |
| E_to_I | Sample the latent period corresponding to each specified... |
| func_arcs_attributes | Generates a set of segments (with length, density, and... |
| func_time_beta | Functional form of the intensity (beta) as a function of t. |
| hello | Hello, World! |
| Inv_trans | Sample from the cyclic latent period using Brent method... |
| I_to_R | Sample from the cyclic removal period using Brent method... |
| Log_likelihood | The log-likelihood of the non-homogenous Poisson process. |
| mcmc_leaf | The mcmc sampling of the non-homogenous Poisson process. |
| Plot_dyn | Visualisation of the dynamic of the epidemic |
| rBTFinv3 | Sample the period it will take for n leaf to emerge. |
| rBTFinv4 | Sample the period it took for n leaf to emerge. |
| r_IR | Random draw from the cyclic removal period using Brent method... |
| Samp_dis | Sample the distance at which the inoculum will travel. |
| Simulate | Generate a certain number of temporal observation from the... |
| Simulate_contact_control | Simulation of the epidemic control process |
| Simulate_contact_control1 | Simulation of the epidemic control process with weibull... |
| Simulate_contact_control2 | Simulation of the epidemic control process with cyclic... |
| Simulate_contact_control3 | Simulation of the epidemic control process with cyclic... |
| Simulate_contact_control_LER | Simulation of the epidemic control process considering a... |
| Simulate_contact_control_LER_africa | Simulation of banana landscape to address the question of... |
| Simulate_contact_control_LER_farm | Simulation of the epidemic control process considering a... |
| Simulate_contact_control_v0 | Simulation of the epidemic control process old version |
| Simulate_contact_model | Simulation of the epidemic process |
| simulate_NHPP_next_event | Simulation of the time of the next event of a non-homogeneous... |
| Sub_set | 'Sub_set' Count the number of observation during a certain... |
| Sum_Leaf_emergence_rate | Functional form of the intensity of the non-homogenous... |
| Trajectory | Temporal trajectory to computing the confidence band |
| Trajectory_all | Temporal trajectory to computing the confidence band |
| Trajectory_dis | Temporal trajectory to computing the wave speed |
| Trajectory_ripley | Temporal trajectory to computing the confidence band for... |
