Files in hughesevoanth/NILC

DESCRIPTION
Downsampling_report.docx
NAMESPACE
NILC.Rproj
NILC/.Rbuildignore
NILC/.gitignore
NILC/DESCRIPTION
NILC/NAMESPACE
R/Test_DF_Correlations.R R/factor_on_factor.R R/factor_on_numeric.R R/moose_barplot.R R/numeric_on_numeric.R R/rntransform.R R/ztransform.R README.md VariablesEffectingPerformance.Rmd VariablesEffectingPerformance.pdf
data/SupplementaryMaterial2.xlsx
man/Test_DF_Correlations.Rd man/factor_on_factor.Rd man/factor_on_numeric.Rd man/moose_barplot.Rd man/numeric_on_numeric.Rd man/rntransform.Rd man/ztransform.Rd pdf_figures/CS_@DP1_CorrelationBarPlot.pdf pdf_figures/CS_vs_UniqueReads.pdf pdf_figures/CorrelationPlot_DownSampled_DataSet.pdf pdf_figures/CorrelationPlot_FullDataSet.pdf pdf_figures/DownSampledData_1.5Monly_MultivariateVarExp_v2.pdf pdf_figures/DownSampledData_1.5Monly_UnivariateVarExp.pdf pdf_figures/DownSampledData_1.5Monly_UnivariateVarExp_v2.pdf pdf_figures/DownSampled_CS@DP1_Uni-n-Multi_ANOVA_etasq.pdf pdf_figures/FullData_UnivariateVarExp.pdf pdf_figures/FullData_UnivariateVarExp_v2.pdf
summary_tables/DownSampleData_1.5M_Correlations.txt
summary_tables/DownSampleData_1.5M_Multivariate_Models.txt
summary_tables/DownSampleData_1.5M_Univariate_CoverageOnTarget_VarExp.txt
summary_tables/DownSampleData_1.5M_Univariate_DP10_VarExp.txt
summary_tables/DownSampleData_1.5M_Univariate_DP1_VarExp.txt
summary_tables/DownSampleData_1.5M_Univariate_DP20_VarExp.txt
summary_tables/DownSampleData_1.5M_Univariate_DP4_VarExp.txt
summary_tables/DownSampleData_1.5M_Univariate_DP50_VarExp.txt
summary_tables/DownSampleData_1.5M_Univariate_Enrichment_VarExp.txt
summary_tables/DownSampleData_1.5M_Univariate_LC_VarExp.txt
summary_tables/DownSampleData_1.5M_Univariate_MappedReads_VarExp.txt
summary_tables/DownSampleData_1.5M_Univariate_OnTargetReliableBases_VarExp.txt
summary_tables/DownSampleData_1.5M_Univariate_OnTargetReliableReads_VarExp.txt
summary_tables/DownSampleData_1.5M_Univariate_PercentageMappedReads_VarExp.txt
summary_tables/DownSampleData_1.5M_Univariate_PercentageOnTargetReliableBases_VarExp.txt
summary_tables/DownSampleData_1.5M_Univariate_PercentageOnTargetReliableReads_VarExp.txt
summary_tables/DownSampleData_1.5M_Univariate_PercentageReliableReads_VarExp.txt
summary_tables/DownSampleData_1.5M_Univariate_PercentageUniqueReads_VarExp.txt
summary_tables/DownSampleData_1.5M_Univariate_ReliableReads_VarExp.txt
summary_tables/DownSampleData_1.5M_Univariate_Specificity_VarExp.txt
summary_tables/DownSampleData_1.5M_Univariate_UniqueReads_VarExp.txt
summary_tables/FullData_Correlations.txt
summary_tables/FullData_Multivariate_Models.txt
summary_tables/FullData_Univariate_CaptureSensitivity(CS)DP10_VarExp.txt
summary_tables/FullData_Univariate_CaptureSensitivity(CS)DP1_VarExp.txt
summary_tables/FullData_Univariate_CaptureSensitivity(CS)DP4_VarExp.txt
summary_tables/FullData_Univariate_CaptureSensitivity(CS)DP50_VarExp.txt
summary_tables/FullData_Univariate_CaptureSpecificity(CSp)_VarExp.txt
summary_tables/FullData_Univariate_CoverageOnTarget_VarExp.txt
summary_tables/FullData_Univariate_EnrichmentFactor(EF)_VarExp.txt
summary_tables/FullData_Univariate_LibraryComplexity(LC)_VarExp.txt
summary_tables/FullData_Univariate_MappedReads_VarExp.txt
summary_tables/FullData_Univariate_OnTargetReliableBases_VarExp.txt
summary_tables/FullData_Univariate_OnTargetReliableReads_VarExp.txt
summary_tables/FullData_Univariate_PercentageMappedReads_VarExp.txt
summary_tables/FullData_Univariate_PercentageOnTargetReliableBases_VarExp.txt
summary_tables/FullData_Univariate_PercentageOnTargetReliableReads_VarExp.txt
summary_tables/FullData_Univariate_PercentageReliableReads_VarExp.txt
summary_tables/FullData_Univariate_PercentageUniqueReads_VarExp.txt
summary_tables/FullData_Univariate_ReliableReads_VarExp.txt
summary_tables/FullData_Univariate_UniqueReads_VarExp.txt
hughesevoanth/NILC documentation built on Dec. 7, 2020, 4:19 p.m.