chrbp_2_rsid | A Function that uses biomaRt to extract the rsid for provided... |
DetermineK | A kmeans and Silhouette Analysis to determine the best K for... |
df.sumstats | A Function to describe each feature in a data frame of... |
enrich.test | A simple hypergeomeric enrichment test |
factor_on_factor | A Function to describe each feature in a data frame of... |
factor_on_numeric | A Function to describe each feature in a data frame of... |
hgtest | A Function to to perform a hypergeometric test and a fisher... |
ind.pvs | A function to identify and extract the principal variables in... |
iPVs | A super function that runs through all of the necessary... |
Kcluster.groups | A function to identify all members of a cluster, generated... |
Kcluster_PVs | A function to identify the Principal Variable of a group |
linear_nonlinear_fits | A function to fit a linear and non-linear GAM model to one's... |
moose_barplot | A Function to make a barplot |
moose_biplot | A Function to describe each feature in a data frame of... |
normW | A function to provide a Shapiro-Wilk w-statistic |
numeric_on_numeric | A Function to describe each feature in a data frame of... |
osmr | A function to perform a one sample MR |
PVA | A Function to extract principle variables of a data set |
quantile_normalisation | A function to perform a quantile normalisation across a... |
rntransform | A Function to rank normal transform a distribution |
rsid_2_chrbp | A Function that uses biomaRt to extract chromosome and base... |
S22update | Function that adds a variable and calcullates the partial... |
snpid_2_geneanno | A Function that uses biomaRt to annotate SNPIDs |
Test_DF_Correlations | A Function estimate the correlation among all columns in a... |
tree.builder | A superfunction to estimate correlations and relationships... |
tree.cut.height.mean.rho | A Function to iterate over a variety of tree cut heights to... |
treecut.iterator.4minrho | A function to iterate over various tree cut height and... |
treecut.pvs | A function to identify the principal variables in your... |
treecut.sumstats | A function to estimate some intra-cluster summary statstics... |
vioplot_col | A Function edited by Zhisong He to add color to a violin plot |
ztransform | A Function to Z transform a vector of data |
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