huzefaKhalil/dgeContrasts: Create contrasts for use with Differential Gene Expression Analysis packages such as edgeR, limma-voom and DESeq2

The package provides a function to create contrasts for use with Differential Gene Expression Analysis packages such as edgeR, limma-voom and DESeq2. Two-way interactions are supported, but only for factors with two levels. The script can handle unbalanced designs as well. Contrasts can be created for all possible comparisons.

Getting started

Package details

AuthorHuzefa Khalil
MaintainerHuzefa Khalil <huzefa.khalil@umich.edu>
LicenseMIT
Version0.1.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("huzefaKhalil/dgeContrasts")
huzefaKhalil/dgeContrasts documentation built on Jan. 18, 2020, 7:19 p.m.