API for hyochoi/SCISSOR
Shape changes in selecting sample outliers in RNA-seq
| Global functions | |
|---|---|
| ADstat.hy | Man page Source code |
| ADstatWins.hy | Man page Source code |
| ES_cutoff_fn | Source code |
| PCnum.gamma.hy | Man page Source code |
| RNAcurve | Man page Source code |
| RNAcurveOne | Source code |
| Relist.hy | Source code |
| Scissor | Man page Source code |
| SlogADstat.hy | Source code |
| adj.center | Man page Source code |
| angle.hy | Source code |
| annotate_junction | Source code |
| bisquare.sse | Source code |
| boxplot.hy | Source code |
| build_gaf | Man page Source code |
| build_pileup | Man page Source code |
| center_data | Man page Source code |
| center_data_v1 | Source code |
| check_normals | Source code |
| collapse_junction | Source code |
| compScales | Source code |
| count_splicedReads | Source code |
| decay.rate.hy | Source code |
| detect_localout | Man page Source code |
| estimate_offset | Source code |
| extract_splicedReads | Source code |
| fastSplitSample | Source code |
| find.exon.hy | Man page Source code |
| find_exon_outliers_i | Source code |
| find_intron_outliers_ie | Source code |
| generdir | Man page Source code |
| getShiftParam | Man page Source code |
| get_JVclass | Source code |
| get_PO | Source code |
| get_Ranges | Man page Source code |
| get_SRcount | Man page Source code |
| get_SpliceRatio | Source code |
| get_Tag | Source code |
| get_exon_offstat | Source code |
| get_exon_onstat | Source code |
| get_intron_onstat | Source code |
| get_junctions | Source code |
| get_offstat | Man page Source code |
| get_sparsePD4one | Man page Source code |
| interpolate.hy | Source code |
| kdeplot.hy | Man page Source code |
| len.intron.hy | Man page Source code |
| lm.pval | Source code |
| locate_region | Source code |
| logtransform_data | Man page Source code |
| miscGlobal | Man page Source code |
| miscLocal | Man page Source code |
| normalize_data | Man page Source code |
| palette_SCISSOR | Man page Source code |
| pca.hy | Source code |
| pca2misc | Source code |
| pd.rate.hy | Man page Source code |
| plot_ScissorOS | Man page Source code |
| plot_ScissorSC | Man page Source code |
| plot_offset | Source code |
| plot_pileup | Man page Source code |
| pos.sd | Source code |
| process_pileup | Man page Source code |
| read_BAM | Man page Source code |
| read_aBAM | Source code |
| resmat.outliers.hy | Source code |
| rhoHuber | Source code |
| scale.factor | Man page Source code |
| scale1StepM | Source code |
| split_junction | Source code |
| yaxis.hy | Source code Source code |
