Man pages for iaradsouza1/MicroarrayMethods
Provide methods for microarray analysis
| calc_var_groups | Calculate variance in defined groups |
| calc_var_total | Calculate the total variance |
| compare_variances | Compare variances |
| create_report | Create report |
| create_tg_dict | Create TG dictionary |
| diff_exp | Differential expression analysis |
| get_annotation | Get annotation |
| import_celfiles | Import celfiles (Affymetrix) |
| import_norm | Import and normalize |
| list_all_attributes | List all attributes |
| list_celfiles | List celfiles in a given directory |
| list_datasets | List ENSEMBL datasets |
| list_platforms | List microarray platforms |
| pca_prop | Plot PCs proportions |
| plot_dendrogram | Samples dendrogram |
| plot_hk | Plot housekeeping expression levels |
| plot_pca | PCA plot |
| remove_probes | Remove probes |
| set_fdata | Set feature data |
