immunogenomics/LISI: Local Inverse Simpson Index (LISI) for scRNAseq data
This method was designed to assess how well mixed cells with different labels are in single cell RNAseq. This method uses the Inverse Simpson's Index to compute diversity of each cell's local neighborhood.
Getting started
Browse package contents
Package details |
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| Author | Ilya Korsunsky |
| Maintainer | Ilya Korsunsky <ilya.korsunsky@gmail.com> |
| License | GPL-3 + file LICENSE |
| Version | 1.0 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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