Man pages for iobis/caspr
PacMAN project R tools.
| add_location_distances | Add distances from a point location to a map. |
| add_obis_dist | Plot OBIS distribution. |
| add_wrims_dist | Add WRiMS distribution records to a map. |
| bold_statistics | Get statistics on marker sequences in BOLD by taxon |
| calculate_risk | Calculate risk from WRiMS summary and reclassified... |
| caspr | PacMAN project R tools |
| create_rocrate_meta | Create RO-Crate metadata JSON. |
| expert_checklists | Fetch expert priority checklists from the PacMAN GitHub... |
| generate_background_points | Generate background points. |
| get_all_occurrences | Get OBIS and GBIF occurrences. |
| get_world | Get unioned world geometry. |
| mr_geometries | Get geometries by MRGID. |
| obis_checklist | Fetch a checklist from OBIS. |
| obis_distribution | Get OBIS distribution |
| plot_location_distances | Plot distances from a point location on a map. |
| plot_obis_dist | Plot OBIS distribution. |
| plot_occurrences | Plot occurrences. |
| plot_prediction | Plot prediction. |
| plot_risk | Plot risk score. |
| plot_risk_score | Plot summary of WRiMS distribution. |
| plot_wrims_dist | Plot WRiMS distribution records. |
| plot_wrims_summary | Plot summary of WRiMS distribution. |
| regional_seas | Variation on cartomisc::regional_seas with a small buffer... |
| risk_analysis | Run risk analysis model. |
| run_model | Run the SDM. |
| upload_risk_analysis | Upload risk analysis to S3 |
| wkt_south_pacific | WKT string for the South Pacific |
| wrims_checklist | Get the complete WRiMS checklist. This may not be complete... |
| wrims_distribution | Get WRiMS distribution records. |
| wrims_summary | Create summary of WRiMS distribution. |
| wrims_summary_for_aphiaid | Create summary of WRiMS distribution. |
