Files in jBernardADFG/ChenaSalchaTowerSonar

Apportion and enumerate salmon on the Chena and Salcha

R/ProcessFiles_ARIS.R R/ProcessFiles_DIDSON.R R/ReadFile_ARIS.R R/ReadFile_DIDSON.R R/allison_plot.R R/calculate_totals.R R/compile_estimates.R R/expand_counts.R R/extract_final_results.R R/extract_length_priors.R R/extract_runtiming_priors.R R/find_convergence_issues.R R/gather_mixture_data.R R/get_length_samples.R R/get_runtiming_samples.R R/mixture_model_3.R R/prepare_historical_counts.R R/prepare_length_data.R R/prepare_runtiming_data.R R/prepare_sonar_counts_for_expansion.R R/prepare_sonar_counts_for_expansion2.R R/prepare_visual_counts_for_expansion.R R/run_hamachan.R R/run_mixture_model.R R/run_mixture_model_2.R R/runningavg_interp.R R/standardize_ARIS.R R/standardize_DIDSON.R R/visual_sonar_plot.R README.md Rfolder/allison_plot.R Rfolder/expansion/compile_estimates.R Rfolder/expansion/expand_counts.R Rfolder/expansion/hamachan/prepare_historical_counts.R Rfolder/expansion/hamachan/run_hamachan.R Rfolder/expansion/prepare_expansion_data/prepare_sonar_counts_for_expansion.R Rfolder/expansion/prepare_expansion_data/prepare_sonar_counts_for_expansion2.R Rfolder/expansion/prepare_expansion_data/prepare_visual_counts_for_expansion.R Rfolder/expansion/runningavg_interp.R Rfolder/expansion/visual_sonar_plot.R Rfolder/extractResults/calculate_totals.R Rfolder/extractResults/extract_final_results.R Rfolder/lengthPriors/extract_length_priors.R Rfolder/lengthPriors/get_length_samples.R Rfolder/lengthPriors/prepare_length_data.R Rfolder/mixtureModel/find_convergence_issues.R Rfolder/mixtureModel/gather_mixture_data.R Rfolder/mixtureModel/mixture_model_3.R Rfolder/mixtureModel/run_mixture_model.R Rfolder/mixtureModel/run_mixture_model_2.R Rfolder/readARIS/ProcessFiles_ARIS.R Rfolder/readARIS/helpers/ReadFile_ARIS.R Rfolder/readDidson/ProcessFiles_DIDSON.R Rfolder/readDidson/helpers/ReadFile_DIDSON.R Rfolder/runtimingPriors/extract_runtiming_priors.R Rfolder/runtimingPriors/get_runtiming_samples.R Rfolder/runtimingPriors/prepare_runtiming_data.R Rfolder/standardizeSonar/standardize_ARIS.R Rfolder/standardizeSonar/standardize_DIDSON.R man/ProcessFiles_ARIS.Rd man/ProcessFiles_DIDSON.Rd man/ReadFile_ARIS.Rd man/ReadFile_DIDSON.Rd man/allison_plot.Rd man/calculate_totals.Rd man/compile_estimates.Rd man/expand_counts.Rd man/extract_final_results.Rd man/extract_length_priors.Rd man/extract_runtiming_priors.Rd man/find_convergence_issues.Rd man/gather_mixture_data.Rd man/get_length_samples.Rd man/get_runtiming_samples.Rd man/prepare_historical_counts.Rd man/prepare_length_data.Rd man/prepare_runtiming_data.Rd man/prepare_sonar_counts_for_expansion.Rd man/prepare_sonar_counts_for_expansion_2.Rd man/prepare_visual_counts_for_expansion.Rd man/run_hamachan.Rd man/run_mixture_model.Rd man/run_mixture_model_2.Rd man/run_mixture_model_3.Rd man/runningavg_interp.Rd man/standardize_ARIS.Rd man/standardize_DIDSON.Rd man/visual_sonar_plot.Rd