Files in jameshay218/covback
Back-calculate from confirmations
.DS_Store
.Rhistory[Conflict]
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/.DS_Store
R/RcppExports.R
R/helpers.R
R/plots.R
R/posteriors.R
R/posteriors_mostly_fixed.R
R/posteriors_single.R
R/priors.R
R/simulations.R
R/simulations_single.R
R/zzz.R
README.md
data/.DS_Store
data/backer_draws.csv
data/export_probs_lower.csv
data/export_probs_matched.csv
data/import_probs.csv
data/import_probs_matched.csv
data/priors/backer_draws.csv
data/raw/.DS_Store
data/raw/export_probs_raw.csv
data/raw/extracted_data_key.csv
data/raw/extracted_import_proportions.csv
data/raw/manual_medrvix_table.xlsx
data/raw/medarxiv_TableS2.xlsx
data/raw/medarxiv_TableS3.xlsx
data/real/.DS_Store
data/real/confirmed_data_matched_final.csv
data/real/confirmed_data_raw.csv
data/real/midas_data_final.csv
data/real/old/confirmed_data_matched.csv
data/real/province_names.csv
data/real/zhang_appendix_lancet.csv
data/real/zhang_appendix_lancet.xlsx
data/simulated/.DS_Store
data/simulated/sim_data.csv
delays.csv
fig1.png
fig2.png
fig3.png
main_1_multivariate_chain.csv
man/hello.Rd
pars/.DS_Store
pars/TableS3.xlsx
pars/descriptions.xlsx
pars/limitations_table.xlsx
pars/partab_logistic_growth.csv
pars/redundant/.DS_Store
pars/redundant/partab_provinces.csv
pars/redundant/partab_single.csv
pars/redundant/prior_quantiles.csv
pars/redundant/startTab.csv
pars/redundant/startTab_back_calc.csv
plots/figS5.pdf
plots/figS5.png
scripts/.DS_Store
scripts/1_extract_midas_data.R
scripts/2_setup_import_data.R
scripts/3_main_result.R
scripts/4_summarise_chain_list.R
scripts/4_summarise_chain_listB.R
scripts/5_figures.R
scripts/6_figS5.R
scripts/6_figS5B.R
scripts/7_figS2.R
scripts/back_of_envelope_exportations.R
scripts/figures/.DS_Store
scripts/figures/export_proj_plots.R
scripts/figures/fig1.R
scripts/figures/fig2.R
scripts/scenario_key.csv
scripts/simulations/sim_est_ada.R
scripts/simulations/sim_recover_JH.R
scripts/simulations/sim_single_ada.R
scripts/simulations/sim_single_jh.R
scripts/utility/check_convergence_tmp.R
scripts/utility/read_arcgis_data.R
scripts/utility/test_model.R
src/.DS_Store
src/RcppExports.cpp
src/RcppExports.o
src/covback.so
src/helpers.cpp
src/helpers.o
src/model_funcs.cpp
src/model_funcs.o
vignettes/30_provinces_multivariate_chain.csv
vignettes/initial_run_univariate_chain.csv
vignettes/re_estimation_prior_long_multivariate_chain.csv
vignettes/re_estimation_prior_univariate_chain.csv
vignettes/re_estimation_short_univariate_chain.csv
vignettes/re_estimation_univariate_chain.csv
vignettes/real_fit_with_local_ada.Rmd
vignettes/sim_single_ada.Rmd
