Files in jamieweaver/BcnStudyAThon
A Package Skeleton for Comparative Effectiveness Studies
.Rbuildignore
.Rprofile
.gitignore
BcnStudyAThon.Rproj
DESCRIPTION
HydraConfig.json
NAMESPACE
R/CohortMethod.R
R/CreateAllCohorts.R
R/CreateCohorts.R
R/Diagnostics.R
R/Export.R
R/Main.R
R/Package.R
R/ShinyApps.R
R/SubmitResults.R
R/SynthesizePositiveControls.R
documents/Kim_et_al-2011-Pharmacoepidemiology_and_Drug_Safety.pdf
documents/Kim_et_al-2016-Arthritis_&_Rheumatology.pdf
documents/Lacaille_et_al-2008-Arthritis_Care_&_Research.pdf
documents/README.md
documents/TH09-08-0595.pdf
documents/Winthrop_et_al-2011-Pharmacoepidemiology_and_Drug_Safety.pdf
documents/Xie_et_al-2019-Arthritis_Care_&_Research.pdf
documents/clep-225568-validation-of-cancer-diagnoses-in-electronic-health-records-_2.pdf
documents/e009309.full.pdf
extras/CodeToRun.R
extras/PackageMaintenance.R
inst/cohorts/EHDEN_Studyathon_Acute_myocardial_infarction_events.json
inst/cohorts/EHDEN_Studyathon_Leflunomide_new_users_with_rheumatoid_arthritis.json
inst/cohorts/EHDEN_Studyathon_Persons_with_a_malignant_neoplasm_other_than_nonmelanoma_skin_cancer.json
inst/cohorts/EHDEN_Studyathon_Persons_with_thrombocytopenia.json
inst/cohorts/EHDEN_Studyathon_Stroke_ischemic_or_hemorrhagic_events.json
inst/cohorts/EHDEN_Studyathon_hydroxychloroquine_new_users_with_rheumatoid_arthritis.json
inst/cohorts/EHDEN_Studyathon_methotrexate_new_users_with_rheumatoid_arthritis.json
inst/cohorts/EHDEN_Studyathon_sulfasalazine_new_users_with_rheumatoid_arthritis.json
inst/settings/CohortsToCreate.csv
inst/settings/NegativeControls.csv
inst/settings/StudySpecification.json
inst/settings/TcosOfInterest.csv
inst/settings/cmAnalysisList.json
inst/shiny/EvidenceExplorer/DataPulls.R
inst/shiny/EvidenceExplorer/EvidenceExplorer.Rproj
inst/shiny/EvidenceExplorer/PlotsAndTables.R
inst/shiny/EvidenceExplorer/Table1Specs.csv
inst/shiny/EvidenceExplorer/global.R
inst/shiny/EvidenceExplorer/server.R
inst/shiny/EvidenceExplorer/ui.R
inst/sql/sql_server/CreateCohortTable.sql
inst/sql/sql_server/EHDEN_Studyathon_Acute_myocardial_infarction_events.sql
inst/sql/sql_server/EHDEN_Studyathon_Leflunomide_new_users_with_rheumatoid_arthritis.sql
inst/sql/sql_server/EHDEN_Studyathon_Persons_with_a_malignant_neoplasm_other_than_nonmelanoma_skin_cancer.sql
inst/sql/sql_server/EHDEN_Studyathon_Persons_with_thrombocytopenia.sql
inst/sql/sql_server/EHDEN_Studyathon_Stroke_ischemic_or_hemorrhagic_events.sql
inst/sql/sql_server/EHDEN_Studyathon_hydroxychloroquine_new_users_with_rheumatoid_arthritis.sql
inst/sql/sql_server/EHDEN_Studyathon_methotrexate_new_users_with_rheumatoid_arthritis.sql
inst/sql/sql_server/EHDEN_Studyathon_sulfasalazine_new_users_with_rheumatoid_arthritis.sql
inst/sql/sql_server/GetCounts.sql
inst/sql/sql_server/NegativeControlOutcomes.sql
man/BcnStudyAThon.Rd
man/createCohorts.Rd
man/execute.Rd
man/exportResults.Rd
man/generateDiagnostics.Rd
man/launchEvidenceExplorer.Rd
man/prepareForEvidenceExplorer.Rd
man/runCohortMethod.Rd
man/submitResults.Rd
man/synthesizePositiveControls.Rd
readme.md
