| dot-arrayPlot | Array pie plot | 
| dot-clusterGraph | Cluster graph | 
| dot-computeClusterColors | Compute cluster colors | 
| dot-likeness | Likeness score | 
| dot-logsumexp | Logsumexp | 
| dot-makeApp | SpatialCPie App | 
| dot-makeServer | SpatialCPie server | 
| dot-makeUI | SpatialCPie UI | 
| dot-maximizeOverlap | Maximize overlap | 
| dot-preprocessData | Preprocess data | 
| dot-SVGBarplot | SVG barplot | 
| dot-tidyAssignments | Tidy assignments | 
| dot-zscore | Z-score | 
| parseSpotFile | Parse spot detector output | 
| runCPie | Run SpatialCPie | 
| SpatialCPie-package | SpatialCPie: Cluster analysis of Spatial Transcriptomics data | 
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