| dot-arrayPlot | Array pie plot |
| dot-clusterGraph | Cluster graph |
| dot-computeClusterColors | Compute cluster colors |
| dot-likeness | Likeness score |
| dot-logsumexp | Logsumexp |
| dot-makeApp | SpatialCPie App |
| dot-makeServer | SpatialCPie server |
| dot-makeUI | SpatialCPie UI |
| dot-maximizeOverlap | Maximize overlap |
| dot-preprocessData | Preprocess data |
| dot-SVGBarplot | SVG barplot |
| dot-tidyAssignments | Tidy assignments |
| dot-zscore | Z-score |
| parseSpotFile | Parse spot detector output |
| runCPie | Run SpatialCPie |
| SpatialCPie-package | SpatialCPie: Cluster analysis of Spatial Transcriptomics data |
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