API for jdavilal/excerno
Fillter out somatic mutations generated by the Formalin-Fixed Paraffin-Embedded (FFPE) tissue preservation technique from cancer tissue
| Global functions | |
|---|---|
| classify_simulated_samples | Man page Source code |
| create_gr_from_sample | Man page Source code |
| create_signature_sample_vector | Man page Source code |
| excerno_vcf | Man page Source code |
| extract_all_prob | Man page Source code |
| find_signature_name | Man page Source code |
| find_signature_names | Man page Source code |
| format_mutation | Man page Source code |
| get_classification | Man page Source code |
| get_classifications | Man page Source code |
| get_ffpe_signature | Man page Source code |
| get_mutation_types | Man page Source code |
| get_mutational_vector | Man page Source code |
| get_mutational_vectors | Man page Source code |
| print_info | Source code |
| signature_cosine_similarity | Man page Source code |
| write_classification_to_vcf | Man page Source code |
| write_grange_to_vcf | Man page Source code |
