Files in jennifercelane/PLEMSKAI
A Package Skeleton for Comparative Effectiveness Studies
DESCRIPTION
HydraConfig.json
NAMESPACE
PLEMSKAIalloutcomes.Rproj
R/CohortMethod.R
R/CreateAllCohorts.R
R/CreateCohorts.R
R/Export.R
R/Main.R
R/Package.R
R/ShinyApps.R
R/SubmitResults.R
R/SynthesizePositiveControls.R
README 2.md
README.md
documents/README.md
extras/CodeToRun.R
extras/PackageMaintenance.R
extras/README.md
inst/.DS_Store
inst/cohorts/MSK_AI_target_ai.json
inst/cohorts/MSK_AIcomparator_tamoxifen.json
inst/cohorts/MSK_AIoutcome_cts_condition_agesex.json
inst/cohorts/MSK_AIoutcome_cts_surgery_agesex_nonstandard.json
inst/cohorts/MSK_AIoutcome_oa_all_conditionANDsurg_agesex_nonstandard.json
inst/cohorts/MSK_AIoutcome_oa_all_conditiononly_agesex.json
inst/cohorts/MSK_AIoutcome_oa_hand_conditionANDsurg_agesex_nonstandard.json
inst/cohorts/MSK_AIoutcome_oa_hand_condition_agesex.json
inst/cohorts/MSK_AIoutcome_oa_hip_conditionANDsurg_agesex_nonstandard.json
inst/cohorts/MSK_AIoutcome_oa_hip_condition_agesex.json
inst/cohorts/MSK_AIoutcome_oa_knee_conditionANDsurg_agesex_nonstandard.json
inst/cohorts/MSK_AIoutcome_oa_knee_condition_agesex.json
inst/cohorts/MSK_AIoutcome_oa_shoulder_conditionANDsurg_agesex_nonstandard.json
inst/cohorts/MSK_AIoutcome_oa_shoulder_condition_agesex.json
inst/cohorts/MSK_AIoutcome_oa_thumb_conditionANDsurg_agesex_nonstandard.json
inst/cohorts/MSK_AIoutcome_oa_thumb_condition_agesex.json
inst/cohorts/MSK_AIoutcome_tendinopathy_all_conditionANDsurg_agesex_nonstandard.json
inst/cohorts/MSK_AIoutcome_tendinopathy_all_conditiononly_agesex.json
inst/cohorts/MSK_AIoutcome_tendinopathy_elbow_conditionANDsurg_agesex_nonstandard.json
inst/cohorts/MSK_AIoutcome_tendinopathy_elbow_condition_agesex.json
inst/cohorts/MSK_AIoutcome_tendinopathy_footankle_conditionANDsurg_agesex_nonstandard.json
inst/cohorts/MSK_AIoutcome_tendinopathy_footankle_condition_agesex.json
inst/cohorts/MSK_AIoutcome_tendinopathy_handwrist_conditionANDsurg_agesex_nonstandard.json
inst/cohorts/MSK_AIoutcome_tendinopathy_handwrist_condition_agesex.json
inst/cohorts/MSK_AIoutcome_tendinopathy_knee_conditionANDsurg_agesex_nonstandard.json
inst/cohorts/MSK_AIoutcome_tendinopathy_knee_condition_agesex.json
inst/cohorts/MSK_AIoutcome_tendinopathy_shoulder_conditionANDsurg_agesex_nonstandard.json
inst/cohorts/MSK_AIoutcome_tendinopathy_shoulder_condition_agesex.json
inst/settings/CohortsToCreate.csv
inst/settings/NegativeControls.csv
inst/settings/StudySpecification.json
inst/settings/TcosOfInterest.csv
inst/settings/cmAnalysisList.json
inst/shiny/EvidenceExplorer/DataPulls.R
inst/shiny/EvidenceExplorer/EvidenceExplorer.Rproj
inst/shiny/EvidenceExplorer/PlotsAndTables.R
inst/shiny/EvidenceExplorer/Table1Specs.csv
inst/shiny/EvidenceExplorer/global.R
inst/shiny/EvidenceExplorer/server.R
inst/shiny/EvidenceExplorer/ui.R
inst/sql/sql_server/CreateCohortTable.sql
inst/sql/sql_server/GetCounts.sql
inst/sql/sql_server/MSK_AI_target_ai.sql
inst/sql/sql_server/MSK_AIcomparator_tamoxifen.sql
inst/sql/sql_server/MSK_AIoutcome_cts_condition_agesex.sql
inst/sql/sql_server/MSK_AIoutcome_cts_surgery_agesex_nonstandard.sql
inst/sql/sql_server/MSK_AIoutcome_oa_all_conditionANDsurg_agesex_nonstandard.sql
inst/sql/sql_server/MSK_AIoutcome_oa_all_conditiononly_agesex.sql
inst/sql/sql_server/MSK_AIoutcome_oa_hand_conditionANDsurg_agesex_nonstandard.sql
inst/sql/sql_server/MSK_AIoutcome_oa_hand_condition_agesex.sql
inst/sql/sql_server/MSK_AIoutcome_oa_hip_conditionANDsurg_agesex_nonstandard.sql
inst/sql/sql_server/MSK_AIoutcome_oa_hip_condition_agesex.sql
inst/sql/sql_server/MSK_AIoutcome_oa_knee_conditionANDsurg_agesex_nonstandard.sql
inst/sql/sql_server/MSK_AIoutcome_oa_knee_condition_agesex.sql
inst/sql/sql_server/MSK_AIoutcome_oa_shoulder_conditionANDsurg_agesex_nonstandard.sql
inst/sql/sql_server/MSK_AIoutcome_oa_shoulder_condition_agesex.sql
inst/sql/sql_server/MSK_AIoutcome_oa_thumb_conditionANDsurg_agesex_nonstandard.sql
inst/sql/sql_server/MSK_AIoutcome_oa_thumb_condition_agesex.sql
inst/sql/sql_server/MSK_AIoutcome_tendinopathy_all_conditionANDsurg_agesex_nonstandard.sql
inst/sql/sql_server/MSK_AIoutcome_tendinopathy_all_conditiononly_agesex.sql
inst/sql/sql_server/MSK_AIoutcome_tendinopathy_elbow_conditionANDsurg_agesex_nonstandard.sql
inst/sql/sql_server/MSK_AIoutcome_tendinopathy_elbow_condition_agesex.sql
inst/sql/sql_server/MSK_AIoutcome_tendinopathy_footankle_conditionANDsurg_agesex_nonstandard.sql
inst/sql/sql_server/MSK_AIoutcome_tendinopathy_footankle_condition_agesex.sql
inst/sql/sql_server/MSK_AIoutcome_tendinopathy_handwrist_conditionANDsurg_agesex_nonstandard.sql
inst/sql/sql_server/MSK_AIoutcome_tendinopathy_handwrist_condition_agesex.sql
inst/sql/sql_server/MSK_AIoutcome_tendinopathy_knee_conditionANDsurg_agesex_nonstandard.sql
inst/sql/sql_server/MSK_AIoutcome_tendinopathy_knee_condition_agesex.sql
inst/sql/sql_server/MSK_AIoutcome_tendinopathy_shoulder_conditionANDsurg_agesex_nonstandard.sql
inst/sql/sql_server/MSK_AIoutcome_tendinopathy_shoulder_condition_agesex.sql
inst/sql/sql_server/NegativeControlOutcomes.sql
man/SkeletonComparativeEffectStudy-package.Rd
man/createCohorts.Rd
man/execute.Rd
man/exportResults.Rd
man/launchEvidenceExplorer.Rd
man/prepareForEvidenceExplorer.Rd
man/runCohortMethod.Rd
man/synthesizePositiveControls.Rd
man/uploadResults.Rd
renv.lock
renv/.gitignore
renv/activate.R
renv/settings.dcf
