Man pages for jfores/DocTDA
What the Package Does (One Line, Title Case)

add_pseudo_barcodeadd_pseudo_barcode
assign_rounds_for_bcassign_rounds_for_bc
aux_for_extract_multiple_alphaaux_for_extract_multiple_alpha
aux_fun_complete_matricesaux_fun_complete_matrices
aux_functionaux_func
aux_function_samp_baux_function_samp_b
aux_same_drug_diff_strucaux_same_drug_diff_struc
complete_matricescomplete_matrices
compute_bc_and_savecompute_bc_and_save
compute_bc_roundcompute_bc_round
compute_bc_round_multicompute_bc_round_multi
compute_by_squarecompute_by_square
compute_exponential_sumcompute_exponential_sum
compute_homologyCompute horology for one point cloud.
compute_homology_multiComputes homology for multiple alfa carbon coordinate...
compute_kcompute_k
compute_max_dComputes max distance in a point cloud.
compute_max_d_multiCompute maximum distance multi
compute_pbfcompute_pbf
compute_pbf_at_xcompute_pbf_at_x
compute_pbf_for_curvecompute_pbf_for_curve
compute_sim_barcode_paircompute_sim_barcode_pair
compute_sim_barcode_pair_auxcompute_sim_barcode_pair_aux
compute_sim_one_dir_barcompute_sim_one_dir_bar
compute_sim_two_dir_barcompute_sim_two_dir_bar
correct_pdbqtcorrect_pdbqt
create_config_pdbcreate_config_pdb
create_vina_commandcreate_vina_command
create_vina_command_2create_vina_command_2
den_subden_sub
download_pdb_structuresDownload a large number of PDB files.
element_wise_divisionelement_wise_division
extract_alpha_chainsextract_alpha_chains
extract_and_clean_multiExtract Bio And clean
extract_DrugBank_dataExtract Information from DrugBank
extract_multiple_alphaextract_multiple_alpha
format_matricesformat_matrices
get_bio_assembly_informationget_bio_assembly_information
get_bio_cleanGet and clean biological assemblies.
get_level_oneget_level_one
get_level_twoget_level_two
get_paths_to_dockget_paths_to_dock
mount_matrixmount_matrix
parallel_drug_prepparallel_drug_prep
parse_max_energy_vinaparse_max_energy_vina
pipePipe operator
plot_barcodesplot_barcode
plot_dimensionsplot_dimensions
prepare_protein_structureprepare_protein_structure
read_doc_res_from_list_dirsread_doc_res_from_list_dirs
read_multi_pdbRead multiple pdb files
remove_cerosremove_ceros
rename_drug_sdfrename_drug_sdf
same_drug_diff_strucsame_drug_diff_struc
sample_structures_asample_structures_a
sample_structures_bsample_structures_b
search_bcssearch_bcs
sum_numsum_num
transform_sim_mattransform_sim_mat
x_substractionx_sustraction
jfores/DocTDA documentation built on March 19, 2022, 9:37 p.m.