Man pages for jgarriga65/bigMap
Big Data Mapping
| bdm.boxp | Clustering statistics box-plot. |
| bdm.cost | ptSNE cost & size plot. |
| bdm.dMap | Class density maps |
| bdm.dMap.plot | Class density maps plot. |
| bdm.example | Example dataset |
| bdm.hlCorr | HD/LD correlation. |
| bdm.init | Embedding initialization. |
| bdm.knp | k-ary Neighborhood Preservation |
| bdm.knp.plot | k-ary Neighborhood Preservation plot |
| bdm.labels | Get data-point clustering labels. |
| bdm.merge.s2nr | Merging of clusters based on signal-to-noise-ratio. |
| bdm.mpi.start | Initialize parallel computing environment. |
| bdm.mpi.stop | Stops MPI parallel computing environment. |
| bdm.mtsne | Multi-core t-SNE (mtSNE) |
| bdm.optk.plot | Plots the signal-to-noise-ratio as a function of the number... |
| bdm.optk.s2nr | Find optimal number of clusters based on... |
| bdm.pakde | Perplexity-adaptive kernel density estimation |
| bdm.pakde.plot | Plot paKDE (density landscape) |
| bdm.pMap | Precision map (quantile map of betas) |
| bdm.ptsne | Parallelized t-SNE (ptSNE) |
| bdm.ptsne.plot | Plot ptSNE (low-dimensional embedding) |
| bdm.qMap | ptSNE quantile-maps |
| bdm.restart | Restart pt-SNE |
| bdm.wtt | Watertrack transform (WTT) |
| bdm.wtt.plot | Plot WTT (clustering) |
