Man pages for jorgeyslas/phfrailty
Phase-type frailty models
| bivphasetype | Constructor function for bivariate phase-type distributions |
| bivphasetype-class | Bivariate phase-type distributions |
| bivph_density | Bivariate phase-type joint density |
| bivph_laplace | Bivariate phase-type joint Laplace |
| bivph_laplace_der_nocons | Derivative of order (n,m) of the joint Laplace of a bivariate... |
| bivph_tail | Bivariate phase-type joint tail |
| cdf | New generic for the distribution function of matrix... |
| cdf-frailty-method | Distribution method for univariate phase type frailty models |
| cdf-mp-method | Distribution method for univariate phase type mixed Poisson... |
| cdf-phasetype-method | Distribution method for phase-type distributions |
| clone_matrix | Clone a matrix |
| clone_vector | Clone a vector |
| coef-bivphasetype-method | Coef method for bivphasetype class |
| coef-correlated-method | Coef method for correlated frailty class |
| coef-frailty-method | Coef method for univariate frailty class |
| coef-mp-method | Coef method for univariate phase-type mixed Poisson class |
| coef-phasetype-method | Coef method for phasetype class |
| coef-shared-method | Coef method for shared frailty class |
| corr | New generic for the correlation of multivariate matrix... |
| corr-bivphasetype-method | Correlation method for bivphasetype class |
| correlated | Constructor function for correlated phase-type frailty models |
| correlated-class | Correlated phase-type frailty model |
| cross | New generic for the cross ratio function of matrix... |
| cross-shared-method | Cross method for shared phase-type frailty models |
| cumulate_matrix | Cumulate matrix |
| cumulate_vector | Cumulate vector |
| dens | New generic for the density of matrix distributions |
| dens-bivphasetype-method | Density method for bivariate phase-type distributions |
| dens-correlated-method | Density method for correlated phase-type frailty models |
| dens-frailty-method | Density method for univariate phase type frailty models |
| dens-mp-method | Density method for univariate phase type mixed Poisson models |
| dens-phasetype-method | Density method for phase-type distributions |
| dens-shared-method | Density method for shared phase-type frailty models |
| discretizate_bivdensity | Discretization of a bivariate density |
| discretizate_density | Discretization of a univariate density |
| embedded_mc | Embedded Markov chain of a sub-intensity matrix |
| EMstep | EM for phase-type distributions using Pade for matrix... |
| EMstep_bivph | EM for bivariate phase-type distributions using Pade for... |
| fit | New generic for estimation of matrix distributions |
| fit-correlated-method | Fit method for correlated phase-type frailty models |
| fit-mp-method | Fit method for phase-type mixed Poisson models |
| fit-phasetype-method | Fit method for phase-type frailty models |
| fit-shared-method | Fit method for shared phase-type frailty models |
| frailty | Constructor function for univariate phase type frailty models |
| frailty-class | Phase type frailty model |
| haz | New generic for the hazard rate of matrix distributions |
| haz-frailty-method | Hazard rate method for univariate phase type frailty models |
| haz-phasetype-method | Hazard rate method for phase-type distributions |
| inf_norm | L_inf norm of a matrix |
| initial_state | Initial state of Markov jump process |
| marginal | New generic for the marginals of multivariate matrix... |
| marginal-bivphasetype-method | Marginal method for bivphasetype class |
| marginal-correlated-method | Marginal method for correlated frailty class |
| marginal-shared-method | Marginal method for shared frailty class |
| matrix_exponential | Matrix exponential |
| matrix_power | Computes A^n |
| matrix_VanLoan | Creates the matrix (A1, B1 ; 0, A2) |
| merge_matrices | Merges the matrices S11, S12 and S22 into a sub-intensity... |
| moment | New generic for moment of matrix distributions |
| moment-bivphasetype-method | Moment method for bivphasetype class |
| moment-phasetype-method | Moment method for phase-type distributions |
| mp | Constructor function for univariate phase type mixed Poisson... |
| mp_aux_density | Phase-type mixed Poisson density with covariates |
| mp-class | Phase type mixed Poisson model |
| mp_cor_dens | Correlated Phase-type mixed Poisson density |
| mp_cor_dens_aux | Correlated Phase-type mixed Poisson density with covariates |
| mp_cor_dens_cov | Correlated Phase-type mixed Poisson density with covariates |
| mp_density | Phase-type mixed Poisson density |
| mp_density_cov | Phase-type mixed Poisson density with covariates |
| new_state | New state in a Markov jump process |
| phasetype | Constructor function for phase-type distributions |
| phasetype-class | Phase-type distributions |
| ph_cdf | Phase-type cdf or tail |
| ph_density | Phase-type density |
| ph_laplace | Laplace transform of a phase-type distribution |
| ph_laplace_der_nocons | Derivative of order n of the Laplace transform of a... |
| quan | New generic for the quantile of matrix distributions |
| quan-phasetype-method | Quantile method for phase-type distributions |
| random_structure | Random structure of a phase-type |
| random_structure_bivph | Random structure of a bivariate phase-type |
| rmph | Simulate a MPH* random vector |
| rphasetype | Simulate phase-type |
| shared | Constructor function for shared phase-type frailty models |
| shared-class | Shared phase-type frailty model |
| show-bivphasetype-method | Show method for bivariate phase-type distributions |
| show-correlated-method | Show method for correlated phase-type frailty models |
| show-frailty-method | Show method for univariate phase type frailty models |
| show-mp-method | Show method for univariate phase type mixed Poisson models |
| show-phasetype-method | Show method for phase type distributions |
| show-shared-method | Show method for shared phase-type frailty models |
| sim | New generic for simulating matrix distributions |
| sim-bivphasetype-method | Simulation method for bivariate phase-type distributions |
| sim-correlated-method | Simulation method for correlated phase-type frailty models |
| sim-frailty-method | Simulation method for univariate phase type frailty models |
| sim-mp-method | Simulation method for univariate phase type mixed Poisson... |
| sim-phasetype-method | Simulation method for phase-type distributions |
| sim-shared-method | Simulation method for shared phase-type frailty models |
| surv | New generic for the survival function of matrix distributions |
| surv-bivphasetype-method | Survival method for bivariate phase-type distributions |
| surv-correlated-method | Survival method for correlated phase-type frailty models |
| surv-frailty-method | Survival method for univariate phase type frailty models |
| surv-phasetype-method | Survival method for phase-type distributions |
| surv-shared-method | Survival method for shared phase-type frailty models |
| vector_of_matrices | Computes elements S^n until the value size_vec |
| vector_of_powers | Computes elements A^(n + 1) until the given size |
