API for josefin-werme/lava
Local Analysis of [co]Variant Association
| Global functions | |
|---|---|
| .onLoad | Source code |
| align | Source code |
| bivar.cond.stats | Source code |
| bivariate.integral | Source code |
| cap | Source code |
| check.files.exist | Source code |
| check.folders.exist | Source code |
| check.index | Source code |
| check.parameter | Source code |
| check.reference | Source code |
| ci.bivariate | Source code |
| ci.multivariate | Source code |
| ci.pcor | Source code |
| com.pair | Source code |
| compute_info | Source code |
| compute_ld | Source code |
| conditional.norm | Source code Source code |
| decompose.ld | Source code |
| estimate.params | Source code |
| estimate.pcor | Source code |
| estimate.std | Source code |
| filter.params | Source code |
| find.b0 | Source code |
| find.beta | Source code |
| format.pvalues | Source code |
| format.z | Source code |
| get.input.info | Source code |
| harmonize.snps | Source code |
| integral.p | Source code |
| load.reference | Source code |
| load_ld | Source code |
| load_plink | Source code |
| map.alleles | Source code |
| meta.analyse.locus | Man page Source code |
| multi.cond.stats | Source code |
| multivariate.integral | Source code |
| partial.cor | Source code |
| partial.cov | Source code |
| partial.var | Source code |
| pcov.cond.stats | Source code |
| pcov.integral | Source code |
| process.binary | Source code |
| process.eqtl.input | Man page Source code |
| process.eqtl.input.preprocessed | Man page Source code |
| process.eqtl.locus | Man page Source code |
| process.input | Man page Source code |
| process.locus | Man page Source code |
| process.sample.overlap | Source code |
| process.sumstats | Source code |
| read.bim.custom | Source code |
| read.ld | Source code |
| read.loci | Man page Source code |
| read.sumstats.file | Source code |
| run.bivar | Man page Source code |
| run.multireg | Man page Source code |
| run.pcor | Man page Source code |
| run.univ | Man page Source code |
| run.univ.bivar | Man page Source code |
| set.chromosomes | Man page Source code |
| set.tissue | Man page Source code |
| stat.error | Source code |
| sum.error | Source code |
| univariate.test | Source code |
