Files in jtipton25/BayesMRA
Bayesian Multi-Resolution Gaussian Process Approximations
.Rbuildignore
.covrignore
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.github/workflows/pkgdown.yaml
.github/workflows/test-coverage.yaml
.gitignore
BayesMRA.Rproj
DESCRIPTION
NAMESPACE
NEWS.md
R/RcppExports.R
R/data.R
R/dmvn_smw.R
R/make-Q-alpha_2d.R
R/make-Q-alpha_tau2.R
R/make_basis.R
R/make_constraint.R
R/mcmc_mra.R
R/mcmc_mra_integrated.R
R/mcmc_mra_vecchia.R
R/mra-wendland-2d-pred.R
R/mra-wendland-2d.R
R/normalize-basis.R
R/partition_observations.R
R/plot_MRA_grid.R
R/plot_fitted_MRA.R
R/plot_fitted_alphas.R
R/plot_fitted_process.R
R/plot_posterior_params.R
R/plot_predicted_process.R
R/plot_sim_vs_fitted.R
R/plot_sparse_matrix.R
R/plot_test_data.R
R/plot_trace.R
R/plot_trace_alpha.R
R/predicates.R
R/predict_mra.R
R/recover_alpha.R
R/unscale_estimates.R
R/update-tuning.R
R/wendland_basis.R
R/zzz.R
README.Rmd
README.md
_pkgdown.yml
codecov.yml
cran-comments.md
data/all_sat_temps.RData
data/all_sim_data.RData
data/code_test.RData
development/mcmc_mra_integrated.R
images/MRA-grid-neighbors.png
images/MRA-grid.png
images/MRA-random-effects.png
images/MRA-random-effects2.png
images/MRA-resolutions.png
images/MRA-simulated-data.png
images/estimated-vs-predicted-pp.png
images/estimated-vs-predicted.png
images/fitted-process-pp.png
images/fitted-process.png
images/fitted-spatial-random-effects.png
images/posterior-parameters.png
images/precision-matrix-sparsity.png
images/sample-data.png
images/sim-vs-fitted-pp-process.png
images/sim-vs-fitted-process.png
images/sparse-matrix.png
images/test-data/test-data-fitted-MRA-constrained.png
images/test-data/test-data-fitted-MRA-no-constraint.png
images/test-data/test-data-fitted-alpha-constrained.png
images/test-data/test-data-fitted-alpha-no-constraint.png
images/test-data/test-data-fitted-process-constrained.png
images/test-data/test-data-fitted-process-no-constraint.png
images/test-data/test-data-posterior-constrained.png
images/test-data/test-data-posterior-no-constraint.png
images/test-data/test-data-predicted-process-constrained.png
images/test-data/test-data-predicted-process-no-constraint.png
images/test-data/test-data-trace-alpha-constrained.png
images/test-data/test-data-trace-alpha-no-constraint.png
images/test-data/test-data-trace-plots-constrained.png
images/test-data/test-data-trace-plots-no-constraint.png
images/test-data/test-data.png
images/trace-plots-alpha.png
images/trace-plots.png
inst/include/BayesMRA.h
inst/include/BayesMRA_RcppExports.h
man/BayesMRA.Rd
man/all_sat_temps.Rd
man/all_sim_data.Rd
man/calc_W_star.Rd
man/calc_omega_norm.Rd
man/code_test.Rd
man/dmvn_smw.Rd
man/is_integer.Rd
man/is_integer_matrix.Rd
man/is_numeric.Rd
man/is_numeric_matrix.Rd
man/is_numeric_vector.Rd
man/is_numeric_vector_with_na.Rd
man/is_numeric_with_na.Rd
man/is_positive_integer.Rd
man/is_positive_numeric.Rd
man/is_sympd_matrix.Rd
man/make_Q_alpha_2d.Rd
man/make_Q_alpha_tau2.Rd
man/make_basis.Rd
man/make_constraint.Rd
man/mcmc_mra.Rd
man/mcmc_mra_integrated.Rd
man/mcmc_mra_vecchia.Rd
man/mra_wendland_2d.Rd
man/mra_wendland_2d_pred.Rd
man/partition_observations.Rd
man/plot_MRA_grid.Rd
man/plot_fitted_MRA.Rd
man/plot_fitted_alphas.Rd
man/plot_fitted_process.Rd
man/plot_posterior_params.Rd
man/plot_predicted_process.Rd
man/plot_sim_vs_fitted.Rd
man/plot_sparse_matrix.Rd
man/plot_test_data.Rd
man/plot_trace.Rd
man/plot_trace_alpha.Rd
man/predict_mra.Rd
man/recover_alpha.Rd
man/rmvn_arma.Rd
man/rmvn_arma_chol.Rd
man/rmvn_arma_scalar.Rd
man/unscale_beta.Rd
man/unscale_sigma2.Rd
man/update_tuning.Rd
man/update_tuning_mat.Rd
man/update_tuning_mv.Rd
man/update_tuning_mv_mat.Rd
man/update_tuning_vec.Rd
man/wendland_basis.Rd
manuscript/bayesMRA.Rmd
manuscript/jss.bst
manuscript/jss.cls
manuscript/jsslogo.jpg
manuscript/mra.bib
scripts/Bayes-MRA-Vecchia.R
scripts/check-priors-tau2.R
scripts/heaton-fit.R
scripts/job-scheduler-script.R
scripts/mra-manuscript.R
scripts/mra-simulation-integrated.Rmd
scripts/mra-simulation.Rmd
scripts/mra.bib
scripts/plot_sparse_matrices.R
scripts/test-full-conditional-sampling.R
scripts/test_fit-integrated.R
scripts/test_fit.R
scripts/test_fit_resolution.R
src/.gitignore
src/Makevars
src/Makevars.win
src/RcppExports.cpp
src/rmvn_arma.cpp
src/rmvn_arma_scalar.cpp
tests/testthat.R
tests/testthat/test-mcmc-functions.R
tests/testthat/test-mra_wendland_2d.R
tests/testthat/test-normal-samplers.R
tests/testthat/test-plotting.R
tests/testthat/test-precision-matrices.R
tests/testthat/test-predicates.R
vignettes/MRA-grid-1.png
vignettes/build_vignettes.R
vignettes/estimated-alphas-1.png
vignettes/estimated-vs-predicted-1.png
vignettes/mra-simulation.Rmd
vignettes/mra-simulation.Rmd.orig
vignettes/mra.bib
vignettes/plot-data-process-1.png
vignettes/plot-multiresolution-process-1.png
vignettes/plot-neighbors-1.png
vignettes/plot-precision-matrices-1.png
vignettes/plot-random-effects-1.png
vignettes/plot-sampled-data-1.png
vignettes/plot-sim-vs-fitted-effects-1.png
vignettes/simulated-vs-estimated-process-1.png
vignettes/trace-plots-1.png
vignettes/trace-plots-alpha-1.png
