Man pages for junlingm/REpiSim
Mathematical Epidemiological Model Simulations in R
| Arc | specify the properties of an arc in a flowchart |
| Baysian | A subclass of Calibrator that uses a Baysian method.... |
| Calibrator | An R6 class to calibrate a model to data |
| CGillespie | R6 class implementing the Gillespie method susing cpp11 This... |
| change.extension | change the extension of a file |
| Compartmental | An R6 class representing a compartmental model |
| Equilibrium | An R6 class to calculate the equilibrium of a model |
| Expression | constructor |
| flowchart | generate the flow chart for a compartmental model |
| Label | specify the properties of a label in a flowchart |
| Likelihood | An R6 class that defines a likelihood function to be used by... |
| merge.list | A S3 method to merge two lists |
| Metrop | A subclass of Baysian calibrator that uses the mcmc::metrop... |
| MLE | A maximum likelihood calibrator using the bbmle package |
| Model | R6 class representing a mathematical model. |
| NBinom | The negative binomial distribution. |
| Node | declare a node for a flowchart |
| Normal | The normal distribution. |
| NormalProportional | A normal distribution which standard deviation is proportion... |
| ODE | A R6 class for numerically solving the ODE models |
| Optimizer | A subclass of Calibrator that uses an optimizer and an... |
| Poisson | The Poisson distribution. |
| Regular.polygon | declare a regular polygon for the shape of a compartment in a... |
| RGillespie | R6 class implementing the Gillespie method in R This is a... |
| Simulator | A R6 class that is the super class for all numerical... |
| Star | declare a regular star for the shape of a compartment in a... |
| TexFormatter | R6 class to typeset R expressions as latex equations |
| tikz.pdf | generate a PDF file from the given latex commands |
