Files in kalganem/KRSA
KRSA: Kinome Random Sampling Analyzer
.Rbuildignore
.Rprofile
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.github/workflows/pkgdown.yml
.gitignore
.travis.yml
DESCRIPTION
KRSA.Rproj
LICENSE
LICENSE.md
NAMESPACE
R/KRSA_package.R
R/data.R
R/enrichr_lib_call.R
R/krsa.R
R/krsa_ball_model.R
R/krsa_ce_output_kinases.R
R/krsa_ce_output_peptides.R
R/krsa_coverage_plot.R
R/krsa_curve_plot.R
R/krsa_cv_plot.R
R/krsa_enrichr.R
R/krsa_enrichr_plot.R
R/krsa_extractEndPoint.R
R/krsa_extractEndPointMaxExp.R
R/krsa_filter_lowPeps.R
R/krsa_filter_nonLinear.R
R/krsa_filter_ref_pep.R
R/krsa_get_diff.R
R/krsa_get_diff_byChip.R
R/krsa_group_diff.R
R/krsa_heatmap.R
R/krsa_heatmap_grouped.R
R/krsa_histogram_plot.R
R/krsa_qc_steps.R
R/krsa_quick_filter.R
R/krsa_read.R
R/krsa_reverse_krsa_plot.R
R/krsa_sampling.R
R/krsa_scaleModel.R
R/krsa_show_peptides.R
R/krsa_top_hits.R
R/krsa_violin_plot.R
R/krsa_violin_plot_grouped.R
R/krsa_waterfall.R
R/krsa_zscores_plot.R
R/parse_BN_crosstabFile.R
R/utils.R
README.Rmd
README.md
_pkgdown.yml
data-raw/FinEdges_Final_FF.rds
data-raw/FinNodes_Final_FF.rds
data-raw/KRSA_Mapping_PTK_PamChip_86402_v1.txt
data-raw/KRSA_Mapping_STK_PamChip_87102_v1.txt
data-raw/KRSA_coverage_PTK_PamChip_86402_v1.rds
data-raw/KRSA_coverage_STK_PamChip_87102_v1.rds
data-raw/data_process.R
data/KRSA_Mapping_PTK_PamChip_86402_v1.rda
data/KRSA_Mapping_STK_PamChip_87102_v1.rda
data/KRSA_coverage_PTK_PamChip_86402_v1.rda
data/KRSA_coverage_STK_PamChip_87102_v1.rda
data/KRSA_coverage_STK_PamChip_87102_v2.rda
data/ballModel_edges.rda
data/ballModel_nodes.rda
data/ptk_pamchip_86402_mapping.rda
data/stk_pamchip_87102_mapping.rda
docs/404.html
docs/LICENSE-text.html
docs/LICENSE.html
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docs/reference/krsa_ce_output_peptides.html
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docs/reference/krsa_cv_plot.html
docs/reference/krsa_enrichr.html
docs/reference/krsa_enrichr_plot.html
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docs/reference/krsa_get_diff_byChip.html
docs/reference/krsa_group_diff.html
docs/reference/krsa_heatmap.html
docs/reference/krsa_heatmap_grouped.html
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docs/reference/krsa_qc_steps.html
docs/reference/krsa_quick_filter.html
docs/reference/krsa_read.html
docs/reference/krsa_reverse_krsa_plot.html
docs/reference/krsa_sampling.html
docs/reference/krsa_scaleModel.html
docs/reference/krsa_show_peptides.html
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docs/reference/krsa_violin_plot_grouped.html
docs/reference/krsa_waterfall.html
docs/reference/krsa_zscores_plot.html
docs/reference/parse_BN_crosstabFile.html
docs/reference/ptk_pamchip_86402_mapping.html
docs/reference/reexports.html
docs/reference/stk_pamchip_87102_mapping.html
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man/krsa_ce_output_peptides.Rd
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man/krsa_curve_plot.Rd
man/krsa_cv_plot.Rd
man/krsa_enrichr.Rd
man/krsa_enrichr_plot.Rd
man/krsa_extractEndPoint.Rd
man/krsa_extractEndPointMaxExp.Rd
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man/krsa_heatmap_grouped.Rd
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man/krsa_qc_steps.Rd
man/krsa_quick_filter.Rd
man/krsa_read.Rd
man/krsa_reverse_krsa_plot.Rd
man/krsa_sampling.Rd
man/krsa_scaleModel.Rd
man/krsa_show_peptides.Rd
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vignettes/.gitignore
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