Files in kapsner/rBiasCorrection
Correct Bias in DNA Methylation Analyses

.Rbuildignore
.github/workflows/coverage.yml
.github/workflows/lint.yml
.github/workflows/tic.yml
.gitignore
.gitlab-ci.yml
.lintr
DESCRIPTION
FAQ.md LICENSE.md
NAMESPACE
NEWS.md R/aggregated_input.R R/better_model.R R/biascorrection.R R/calibration_plot.R R/clean_dt.R R/create_agg_df.R R/create_exampleplot.R R/create_plots.R R/createbarerrorplots.R R/cubic.R R/helper-table_prep.R R/hyperbolic.R R/nls_solver.R R/plotting_utility.R R/regression_utility.R R/solving_equations.R R/statistics_list.R R/utils.R R/zzz.R README.md
README.qmd
cran-comments.md data-raw/devstuffs.R
data/example._plot.df_agg.rda
data/example._plot_coef_c.rda
data/example._plot_coef_h.rda
data/example.data_calibration.rda
data/example.data_experimental.rda
inst/CITATION
inst/template_calibration.csv
inst/template_experimental.csv
man/aggregated_input.Rd man/better_model.Rd man/biascorrection.Rd man/calibration_plot.Rd man/clean_dt.Rd man/clean_up.Rd man/create_exampleplot.Rd man/createbarerrorplots.Rd man/example._plot.df_agg.Rd man/example._plot_coef_c.Rd man/example._plot_coef_h.Rd man/example.data_calibration.Rd man/example.data_experimental.Rd man/get_timestamp.Rd man/handle_text_input.Rd man/on_start.Rd man/plotting_utility.Rd man/regression_utility.Rd man/solving_equations.Rd man/statistics_list.Rd man/substitutions_create.Rd man/write_csv.Rd man/write_log.Rd
rBiasCorrection.Rproj
tests/testthat.R tests/testthat/_snaps/algorithm_minmax_FALSE.md tests/testthat/_snaps/algorithm_minmax_FALSE_re.md tests/testthat/_snaps/algorithm_minmax_TRUE.md tests/testthat/_snaps/algorithm_minmax_TRUE_re.md tests/testthat/_snaps/clean_dt.md tests/testthat/_snaps/create_aggregated.md tests/testthat/_snaps/cubic.md tests/testthat/_snaps/hyperbolic.md tests/testthat/test-algorithm_minmax_FALSE.R tests/testthat/test-algorithm_minmax_FALSE_re.R tests/testthat/test-algorithm_minmax_TRUE.R tests/testthat/test-algorithm_minmax_TRUE_re.R tests/testthat/test-biascorrection.R tests/testthat/test-clean_dt.R tests/testthat/test-create_aggregated.R tests/testthat/test-cubic.R tests/testthat/test-hyperbolic.R tests/testthat/test-lints.R tests/testthat/test-plotting.R tests/testthat/test-utils.R
tests/testthat/testdata/cal_type_1.csv
tests/testthat/testdata/cal_type_1_less4.csv
tests/testthat/testdata/cal_type_1_wrong_col_1.csv
tests/testthat/testdata/cal_type_1_wrong_col_1_2.csv
tests/testthat/testdata/cal_type_2.csv
tests/testthat/testdata/cal_type_2_heterogenous.csv
tests/testthat/testdata/exp_type_1.csv
tests/testthat/testdata/exp_type_1_empty_col.csv
tests/testthat/testdata/exp_type_1_empty_row.csv
tests/testthat/testdata/exp_type_2.csv
tests/testthat/testdata/exp_type_2_empty_col.csv
tests/testthat/testdata/exp_type_2_empty_row.csv
tests/testthat/testdata/exp_type_2_heterogenous.csv
tic.R
vignettes/.gitignore
vignettes/img/CDH1_CpG1.png
vignettes/img/CDH1_CpG1_corrected_c.png
vignettes/img/CDH1_CpG1_corrected_h.png
vignettes/img/CDH1_error_CpG1_corrected_c.png
vignettes/img/CDH1_error_CpG1_corrected_h.png
vignettes/rBiasCorrection_benchmarking.qmd
vignettes/rBiasCorrection_howto.qmd
kapsner/rBiasCorrection documentation built on June 15, 2025, 12:38 p.m.