kathrinannaotte/haplovalidate: Detecting selected haplotype blocks in Evolve and Resequence experiments

Haplovalidate an extension of the R package haploReconstruct (Franssen et al., 2016), and detects selected haplotypes in a broad range of Pool-Seq time series data. Haplovalidate makes data-driven choices of key parameters for the clustering procedure. For more details see otte et al. bioRxiv

Getting started

Package details

AuthorKathrin A Otte
MaintainerKathrin A Otte <kathrin.anna.otte@gmail.com>
LicenseGPL-3
Version0.1.5
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("kathrinannaotte/haplovalidate")
kathrinannaotte/haplovalidate documentation built on May 21, 2022, midnight