Man pages for keshav-motwani/MultiLORS
| compute_avg_correlation | Compute average correlation across all responses |
| compute_avg_R2 | Compute average R2 across all responses |
| compute_correlation | Compute correlation between actual and predicted per response |
| compute_R2 | Compute R2 per response |
| compute_SSE | Compute SSE per response |
| compute_SST | Compute SST per response |
| compute_tuning_performance | Compute tuning performance on training/validation data |
| compute_tuning_performance_glmnet | Compute tuning performance on training/validation data from... |
| compute_Y | Compute Y given X, Beta, L, E |
| compute_Y_list | Compute list of Y matrices given X, Beta, L, E |
| evaluate_parameters | Evaluate parameters |
| expand_parameters | Expand parameters one at a time given defaults and considered... |
| fit_glmnet | Fit glmnet model on concatenated data |
| fit_OLS | Fit OLS on concatenated data |
| generate_simulation_data | Generate data for simulation study |
| hello | Hello, World! |
| MultiLORS | Fit MultiLORS model |
| plot_actual_vs_predicted | Plot actual versus predicted values for each response... |
| predict_Y | Predict Y |
| prepare_Y_and_indices_test | Make ordering of observed responses consistent and construct... |
| prepare_Y_and_indices_train | Make ordering of observed responses consistent and construct... |
| recompute_L | Recompute L |
| refit_glmnet | Refit glmnet on nonzero coefficients using OLS |
| refit_MultiLORS | Refit MultiLORS on nonzero coefficients and corrected... |
| simulate_Beta | simulate row-sparse Beta matrix |
| simulate_E | simulate E error matrix with specified covariance matrix |
| simulate_E_list | simulate list of E error matrices with specified covariance... |
| simulate_L | simulate L batch effect matrix |
| simulate_L_list | simulate list of L batch effect matrices |
| simulate_X | simulate X matrix |
| simulate_X_list | simulate list of X matrices |
| subset_simulated_data | Subset simulated data to have different observed responses in... |
| which_max | Determine indices of maximum element in matrix |
| which_min | Determine indices of minimum element in matrix |
