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man/unique_combos.Rd
man/unsupervised.Rd
man/wine.Rd
multiblock.Rproj
src/Makevars
src/Makevars.win
src/RcppExports.cpp
src/RcppExports.o
src/crossprods.cpp
src/crossprods.o
src/multiblock.dll
src/multiblock.so
vignettes/.DS_Store
vignettes/.gitignore
vignettes/vignette_A_data.Rmd
vignettes/vignette_B_basic.Rmd
vignettes/vignette_C_unsupervised.Rmd
vignettes/vignette_D_asca.Rmd
vignettes/vignette_E_supervised.Rmd
vignettes/vignette_E_supervised.tex
vignettes/vignette_F_complex.Rmd