| alignStart | Function to align start of a window |
| annotationsToLabels | Function to convert bout-level annotations to instance-level... |
| calcPerformance | Function to calculate performance of a classification model |
| classify | Function to classify accelerometer and/or GPS data |
| clearFiles | Clear files |
| computeEmissionProbs | Compute emission probabilities |
| computeOneAccFeat | Compute one acceleration feature |
| computeOneGPSFeat | Compute one GPS feature |
| computePriorProbs | Compute prior probabilities |
| computeTransProbs | Compute transition probabilities |
| distance | Distance |
| extractAccelerometerFeatures | Extract accelerometer features |
| extractAccFeatsFile | Extract accelerometer features from a file |
| extractFeatsPALMSDir | Extract GPS features from a PALMS directory |
| extractFeatsPALMSOneFile | Extract GPS features from a PALMS file |
| extractLabelsDir | Extract labels from a directory |
| extractLabelsSingleFile | Extract labels from a directory |
| getDateFmt | Get date format |
| hmm | Hidden Markov model |
| isFeatureDirectory | Is feature directory? |
| isInstanceFormat | Is instance format? |
| loadData | Load data |
| loadFeatures | Load features |
| loadLabels | Load labels |
| loadModel | Load model |
| loadPredictions | Load predictions |
| loadPredictionsAndLabels | Load predictions and labels |
| looXval | Function to perform leave-one-out cross-validation |
| rf | Random Forest |
| senseCamLabels | SenseCam Labels |
| sensorsToFeatures | Function to extract featurese from raw sensor data |
| stratSample | Stratified sample |
| testHMM | Test a hidden Markov model |
| testRF | Test a random forest classifier |
| testTwoRFs | Test two random forest classifiers |
| TLBC-package | Two-Level Behavior Classification |
| trainHMM | Train a hidden Markov model |
| trainModel | Function to train a two-level model from accelerometer and/or... |
| trainRF | Train a random forest classifier |
| winSize | Window Size |
| writePredictions | Write predictions to a file |
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