Files in kmorrisongr/ksmthesis

Kyle's Thesis Code

R/analysis_helpers.R R/generate_analysis.R R/generate_data.R R/generate_plots.R R/generate_reordered_results.R R/method_helpers.R R/method_wrappers.R R/plot_helpers.R R/setup.R man/aggregate_cv_results.Rd man/analyze_method.Rd man/analyze_method_permuted.Rd man/balanced_accuracy.Rd man/base_pu_bagging.Rd man/bisect_kmeans.Rd man/efficacy_distance.Rd man/evaluate_method.Rd man/evaluate_method_cv.Rd man/f1_score.Rd man/fdr_line.Rd man/generate_dist_frames.Rd man/generate_dist_new_groups.Rd man/generate_dist_results.Rd man/generate_dists_data.Rd man/generate_effs_data.Rd man/generate_final_settings.Rd man/generate_label_folds.Rd man/generate_method_results.Rd man/generate_plots.Rd man/generate_plottable_gopts.Rd man/generate_plottable_stats.Rd man/generate_pu_folds.Rd man/generate_pu_pred.Rd man/generate_reliable_negatives.Rd man/generate_reliable_negatives_frame.Rd man/generate_results_list.Rd man/generate_seed_data.Rd man/generate_seed_results.Rd man/generate_stats_g1.Rd man/generate_stats_g2.Rd man/get_avg_stats.Rd man/get_seed_data.Rd man/mcc_score.Rd man/melt_val_type_data.Rd man/na_sensitive_fun.Rd man/permute_data.Rd man/plot_clusts.Rd man/plot_stats.Rd man/reorder_method_results.Rd man/setup_thesis.Rd man/wrap_analyze.Rd man/wrap_boot.Rd man/wrap_kmeans.Rd man/wrap_kmeans_bisect_internal.Rd man/wrap_method.Rd man/wrap_one_svm.Rd man/wrap_permute_data.Rd man/wrap_permuted_analyze.Rd man/wrap_plot_stats.Rd man/wrap_pu_bagging.Rd man/wrap_pu_reliable_negative.Rd man/wrap_svm.Rd man/wrap_test.Rd