Man pages for kmorrisongr/ksmthesis
Kyle's Thesis Code
| aggregate_cv_results | aggregate_cv_results |
| analyze_method | analyze_method |
| analyze_method_permuted | analyze_method_permuted |
| balanced_accuracy | balanced_accuracy |
| base_pu_bagging | base_pu_bagging |
| bisect_kmeans | bisect_kmeans |
| efficacy_distance | efficacy_distance |
| evaluate_method | evaluate_method |
| evaluate_method_cv | evaluate_method_cv |
| f1_score | f1_score |
| fdr_line | fdr_line |
| generate_dist_frames | generate_dist_frames |
| generate_dist_new_groups | generate_dist_new_groups |
| generate_dist_results | generate_dist_results |
| generate_dists_data | generate_dists_data |
| generate_effs_data | generate_effs_data |
| generate_final_settings | generate_final_settings |
| generate_label_folds | generate_label_folds |
| generate_method_results | generate_method_results |
| generate_plots | generate_plots |
| generate_plottable_gopts | generate_plottable_gopts |
| generate_plottable_stats | generate_plottable_stats |
| generate_pu_folds | generate_pu_folds |
| generate_pu_pred | generate_pu_pred |
| generate_reliable_negatives | generate_reliable_negatives |
| generate_reliable_negatives_frame | generate_reliable_negatives_frame |
| generate_results_list | generate_results_list |
| generate_seed_data | generate_seed_data |
| generate_seed_results | generate_seed_results |
| generate_stats_g1 | generate_stats_g1 |
| generate_stats_g2 | generate_stats_g2 |
| get_avg_stats | get_avg_stats |
| get_seed_data | get_seed_data |
| mcc_score | mcc_score |
| melt_val_type_data | melt_val_type_data |
| na_sensitive_fun | na_sensitive_fun |
| permute_data | permute_data |
| plot_clusts | plot_clusts |
| plot_stats | plot_stats |
| reorder_method_results | reorder_method_results |
| setup_thesis | setup_thesis |
| wrap_analyze | wrap_analyze |
| wrap_boot | wrap_boot |
| wrap_kmeans | wrap_kmeans |
| wrap_kmeans_bisect_internal | wrap_kmeans_bisect_internal |
| wrap_method | wrap_method |
| wrap_one_svm | wrap_one_svm |
| wrap_permuted_analyze | wrap_permuted_analyze |
| wrap_permute_data | wrap_permute_data |
| wrap_plot_stats | wrap_plot_stats |
| wrap_pu_bagging | wrap_pu_bagging |
| wrap_pu_reliable_negative | wrap_pu_reliable_negative |
| wrap_svm | wrap_svm |
| wrap_test | wrap_test |
