Files in kstagaman/sharpton-lab-dada2-pipeline
Provides Functions to Easily Replicate the Sharpton Lab dada2 Pipeline
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/add2PATH.R
R/dada2_finish.R
R/dada2_upto_qualPlots.R
R/data.R
R/generate_template.R
R/getN.R
R/initiate_pipeline.R
R/my_cat.R
R/read_file.R
R/run_env.R
R/symlink_fastqs.R
README.md
dada2.pipeline.Rproj
data/100_silva_123_pd_fasta_lines.rda
data/silva_seed_v138_align_lines.rda
data/template_code.rda
generate_template_data.R
man/add2PATH.Rd
man/alignment.template.file.lines.Rd
man/dada2.finish.Rd
man/dada2.upto.qualPlots.Rd
man/generate.template.Rd
man/getN.Rd
man/guide.seqs.lines.Rd
man/hello.Rd
man/initiate.pipeline.Rd
man/my.cat.Rd
man/read.file.Rd
man/run.env.Rd
man/symlink.fastqs.Rd
man/template.code.Rd
