API for larssnip/microclass
Tools for taxonomic classification of prokaryotes

Global functions
CountsToMultinom	Source code
CountsToMultinomMulti	Source code
CountsToRDP	Source code
KmerCount	Man page Source code
Kmer_count	Source code
blastClassify16S	Man page Source code
blastDbase16S	Man page Source code
bracken_read_report	Man page Source code
branch_list2qiime	Man page Source code
branch_list2table	Man page Source code
branch_name2taxid	Man page Source code
branch_prune	Man page Source code
branch_retrieve	Man page Source code
branch_table2list	Man page Source code
branch_taxid2name	Man page Source code
branch_taxid2name,	Man page
charToInt	Source code
clr	Man page Source code
getClass	Man page Source code
getDomain	Man page Source code
getFamily	Man page Source code
getGenus	Man page Source code
getOrder	Man page Source code
getPhylum	Man page Source code
getTag	Man page Source code
getTaxonomy	Man page Source code
get_branch	Source code
get_tax_id	Source code
get_taxon_name	Source code
getmicroEnv	Source code
kmer_report	Source code
kraken2_read_report	Man page Source code
kraken2_read_table	Man page Source code
kraken2_taxonomy	Source code
krk2kmer	Source code
microEnv	Source code
microclass	Man page Source code
microclass-package	Man page
multinomClassify	Man page Source code
multinomClassifyCpp	Source code
multinomTrain	Man page Source code
multinomTrainCpp	Source code
putmicroEnv	Source code
rdpClassify	Man page Source code
rdpTrain	Man page Source code
read_names_dmp	Man page Source code
read_nodes_dmp	Man page Source code
reassign_counts	Source code
setParallel	Man page Source code
small.16S	Man page
subset_clade	Man page Source code
subset_tree	Man page Source code
taxMachine	Man page Source code
write_names_dmp	Man page Source code
write_nodes_dmp	Man page Source code