lasseignelab/CINmetrics: An R package for analyzing copy number aberrations as a measure of chromosomal instability
'CINmetrics' (Chromosomal INstability metrics) provides functions to calculate copy number aberrations as a measure of chromosomal instability metrics on masked Copy Number Variation(CNV) data at individual sample level. The The metrics have been implemented as described in the following studies: Baumbusch LO et al. 2013 <doi:10.1371/journal.pone.0054356>, Davidson JM et al. 2014 <doi:10.1371/journal.pone.0079079>, Chin SF et al. 2007 <doi:10.1186/gb-2007-8-10-r215>.
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Package details |
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| Author | Vishal H. Oza, Roshan Darji, Brittany N. Lasseigne |
| Maintainer | Vishal H. Oza <vishoza@uab.edu> |
| License | GPL-3 |
| Version | 0.1.0 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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