Files in leetina4/LSplicing
Generates Long-reads Splicing Graph
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
LSplicing.Rproj
NAMESPACE
R/combineTranscripts.R
R/countReads.R
R/plotReads.R
R/readCoverage.R
R/runLSplicingApp.R
README.md
inst/.DS_Store
inst/extdata/.DS_Store
inst/extdata/LEE_T_A1.png
inst/extdata/example_output.png
inst/extdata/example_refCoord.gff3
inst/extdata/mlx_reads.sorted.bam
inst/extdata/testCountReads.Rdata
inst/extdata/testDataAlgn.Rdata
inst/extdata/testDataRef.Rdata
inst/extdata/testReadCovAlgn.Rdata
inst/extdata/testReadCoverage.Rdata
inst/extdata/test_nanopore_read.sorted.bam
inst/shiny-scripts/lsplicingApp/app.R
inst/shiny-scripts/lsplicingApp/exon_coordinates.tsv
inst/shiny-scripts/lsplicingApp/exon_table.tsv
man/combineTranscripts.Rd
man/countReads.Rd
man/plotReads.Rd
man/readCoverage.Rd
man/runLSplicingApp.Rd
tests/.DS_Store
tests/testthat.R
tests/testthat/.DS_Store
tests/testthat/test_countReads.R
tests/testthat/test_plotReads.R
tests/testthat/test_readCoverage.R
vignettes/.gitignore
vignettes/my-vignette.Rmd
