Man pages for lgs85/covidsch
School-based network model for COVID-19
| case_plot | Case plot for figures |
| dist1_func | Simulate social distancing using data across days |
| dist2_func | Simulate social distancing using data within days |
| dist_setup | Create partial function to sample from gamma distributions |
| draw.contagion | Generate network plot with contagion |
| draw.sch.contagion | Generate school network plot with contagion |
| format_network | Matrix to pairwise list without diagonal |
| inf_fn | Samples the serial interval for given incubation period... |
| inf_prob | Samples the serial interval for given incubation period... |
| network_null | Create null networks |
| outbreak_model | Run a single instance of the branching process model |
| outbreak_setup | Set up initial cases for network model |
| outbreak_step | Infections on one day in the network model |
| parameter_sweep | Sweep across parameters |
| pipe | Pipe operator |
| plot_network | Run an outbreak model and generate network plot with... |
| plot_network_app | Plot a newtwork (shiny app version) |
| plot_sch_network | Run an outbreak model and generate network plot with... |
| scenario_sim | Run a specified number of simulations with identical... |
| theme_ls | GGplot theme for figures |
