Files in libbi/RBi
Interface to 'LibBi'

.Rbuildignore
.github/workflows/R-CMD-check.yaml
.github/workflows/_pkgdown.yml
.github/workflows/lint_changed_files.yaml
.github/workflows/render_readme.yml
.github/workflows/test-coverage.yaml
.gitignore
.lintr
DESCRIPTION
NAMESPACE
NEWS.md R/absolute_path.R R/bi_contents.R R/bi_dim_len.R R/bi_file_summary.R R/bi_model.R R/bi_open.R R/bi_read.R R/bi_write.R R/extract_sample.R R/flatten.r R/generate_dataset.R R/get_traces.R R/installed_libbi_version.r R/libbi.R R/locate_libbi.r R/options.R R/rbi-package.R README.Rmd README.md
_pkgdown.yml
codecov.yml
cran-comments.md
demo/00Index
demo/PZ_PMMH.R demo/PZ_SMC2.R demo/PZ_filtering.R demo/PZ_generate_dataset.R
docker/Dockerfile
docker/Dockerfile.gpu
docker/Dockerfile.rstudio
inst/PZ.bi
inst/SIR.bi
inst/example_dataset.nc
inst/example_output.nc
man/Equals.bi_model.Rd man/Extract.bi_model.Rd man/Extract_assign.bi_model.Rd man/Unequals.bi_model.Rd man/absolute_path.Rd man/add_block.Rd man/assert_files.Rd man/attach_data.Rd man/bi_contents.Rd man/bi_dim_len.Rd man/bi_file_summary.Rd man/bi_generate_dataset.Rd man/bi_model.Rd man/bi_open.Rd man/bi_read.Rd man/bi_write.Rd man/check_sparse_var.Rd man/clean_model.Rd man/create_coord_var.Rd man/create_working_folder.Rd man/enable_outputs.Rd man/extract_sample.Rd man/filter.Rd man/find_block.Rd man/fix.Rd man/flatten.Rd man/generate_dataset.Rd man/get_block.Rd man/get_const.Rd man/get_dims.Rd man/get_name.Rd man/get_traces.Rd man/insert_lines.Rd man/installed_libbi_version.Rd man/is_empty.Rd man/join.Rd man/libbi.Rd man/locate_libbi.Rd man/logLik.Rd man/optimise.Rd man/option_list.Rd man/option_string.Rd man/predict.Rd man/print.Rd man/print_log.Rd man/propose_prior.Rd man/read_libbi.Rd man/remove_lines.Rd man/remove_vars.Rd man/replace_all.Rd man/rewrite.Rd man/run.Rd man/sample.Rd man/sample_obs.Rd man/save_libbi.Rd man/set_name.Rd man/simulate.Rd man/summary.Rd man/to_input.Rd man/update.Rd man/var_names.Rd man/write_model.Rd tests/testthat.R tests/testthat/test-bi-model.r tests/testthat/test-io.r tests/testthat/test-libbi.r tests/testthat/test-samples.r
vignettes/.gitignore
vignettes/bi/SIR_deter.bi
vignettes/bi/SIR_deter_prev.bi
vignettes/bi/SIR_stoch_SDE.bi
vignettes/bi/SIR_stoch_jump.bi
vignettes/idd_models.Rmd vignettes/rbi.Rmd
libbi/RBi documentation built on June 3, 2024, 12:22 p.m.