.Rbuildignore
.Rprofile
.Rproj.user/3B3FE3C5/cpp-definition-cache
.Rproj.user/3B3FE3C5/ctx/ctx-14576/console_actions
.Rproj.user/3B3FE3C5/ctx/ctx-14576/environment
.Rproj.user/3B3FE3C5/ctx/ctx-14576/environment_vars
.Rproj.user/3B3FE3C5/ctx/ctx-14576/history
.Rproj.user/3B3FE3C5/ctx/ctx-14576/libpaths
.Rproj.user/3B3FE3C5/ctx/ctx-14576/options
.Rproj.user/3B3FE3C5/ctx/ctx-14576/plots_dir/INDEX
.Rproj.user/3B3FE3C5/ctx/ctx-14576/plots_dir/empty.png
.Rproj.user/3B3FE3C5/ctx/ctx-14576/rversion
.Rproj.user/3B3FE3C5/ctx/ctx-14576/search_path/environment_data/2
.Rproj.user/3B3FE3C5/ctx/ctx-14576/search_path/environment_data/8
.Rproj.user/3B3FE3C5/ctx/ctx-14576/search_path/package_paths
.Rproj.user/3B3FE3C5/ctx/ctx-14576/search_path/search_path_elements
.Rproj.user/3B3FE3C5/ctx/ctx-14576/settings
.Rproj.user/3B3FE3C5/pcs/build-pane.pper
.Rproj.user/3B3FE3C5/pcs/debug-breakpoints.pper
.Rproj.user/3B3FE3C5/pcs/files-pane.pper
.Rproj.user/3B3FE3C5/pcs/source-pane.pper
.Rproj.user/3B3FE3C5/pcs/windowlayoutstate.pper
.Rproj.user/3B3FE3C5/pcs/workbench-pane.pper
.Rproj.user/3B3FE3C5/persistent-state
.Rproj.user/3B3FE3C5/rmd-outputs
.Rproj.user/3B3FE3C5/saved_source_markers
.Rproj.user/3B3FE3C5/sources/prop/27DDEE04
.Rproj.user/3B3FE3C5/sources/prop/4020BB18
.Rproj.user/3B3FE3C5/sources/prop/4B4F5992
.Rproj.user/3B3FE3C5/sources/prop/4BC1E964
.Rproj.user/3B3FE3C5/sources/prop/5B66DD91
.Rproj.user/3B3FE3C5/sources/prop/9CB6EB96
.Rproj.user/3B3FE3C5/sources/prop/INDEX
.Rproj.user/68B6502B/cpp-definition-cache
.Rproj.user/68B6502B/pcs/files-pane.pper
.Rproj.user/68B6502B/pcs/source-pane.pper
.Rproj.user/68B6502B/pcs/windowlayoutstate.pper
.Rproj.user/68B6502B/pcs/workbench-pane.pper
.Rproj.user/68B6502B/rmd-outputs
.Rproj.user/68B6502B/saved_source_markers
.Rproj.user/68B6502B/sources/prop/75DDA3AE
.Rproj.user/68B6502B/sources/prop/E35FB385
.Rproj.user/68B6502B/sources/prop/INDEX
.Rproj.user/shared/notebooks/patch-chunk-names
.Rproj.user/shared/notebooks/paths
.gitignore
Astroviridae.Rproj
DESCRIPTION
LICENSE
NAMESPACE
R/gene_pick.R
R/genome_check.R
R/motif_find.R
R/protein_pick.R
R/seq_choose.R
R/seq_cmp.R
R/seq_msa.R
R/seq_pick.R
R/seq_psa.R
R/seq_sch.R
R/seq_sum.R
R/statistics.R
R/tree_build.R
R/tree_cmp.R
R/tree_eva.R
R/tree_view.R
README.md
data/Statistics.RData
image/AsV_tree.png
inst/extdata/Astroviridae.xlsx
inst/extdata/Astroviridae_genomes.fas
inst/extdata/aligned_genomes.fas
inst/extdata/names_for_scz_approved_drugs.csv
inst/extdata/names_for_scz_approved_drugs.xlsx
inst/get_sdf_files.R
inst/update_data.R
man/seq_pick.Rd
renv.lock
renv/.gitignore
renv/activate.R
renv/settings.dcf