API for lichen-lab/circMeta
A unified computational framework for genomic feature annotation, differential expression analysis of circular RNAs
| Global functions | |
|---|---|
| .runDESeq2 | Source code |
| .runNB.glm | Source code |
| .runPois.glm | Source code |
| .runPois.ztest | Source code |
| .runPois.ztest2 | Source code |
| .runedgeR | Source code |
| SINEEnrich | Source code |
| SINEScore | Source code |
| addClass | Source code |
| addGene | Source code |
| aluEnrich | Source code |
| aluScore | Source code |
| atoiEnrichAlu | Source code |
| atoiEnrichIntron | Source code |
| chisqTest | Source code |
| circCLRDE | Source code |
| circClass | Source code |
| circFeature | Source code |
| circJuncDE | Source code |
| circJuncDEnorep | Source code |
| circLinear | Source code |
| circNames | Source code |
| dbb | Source code |
| estMu | Source code |
| estRho | Source code |
| estRhoBayes | Source code |
| estRhoPrior | Source code |
| estRhoShrink | Source code |
| fisherTest | Source code |
| geneExp | Source code |
| getAtoI | Source code |
| getCLR | Source code |
| getJuncIntron | Source code |
| intronLen | Source code |
| lrTest | Source code |
| rbb | Source code |
| runDESeq2 | Source code |
| runNB.glm | Source code |
| runPois.glm | Source code |
| runPois.ztest | Source code |
| runedgeR | Source code |
| stringToGRange | Source code |
| waldTest | Source code |
