lixiang117423/ggmotif: Extract and Visualize Motif Information from MEME Software

Extract and visualize motif information from XML file from MEME software. In biology, a motif is a nucleotide or amino acid sequence pattern that is widespread and usually assumed to be related to specifical biological functions. There exist many software was used to discover motif sequences from a set of nucleotide or amino acid sequences. MEME is almost the most used software to detect motif. It's difficult for biologists to extract and visualize the location of a motif on sequences from the results from MEME software.

Getting started

Package details

AuthorXiang LI
MaintainerXiang LI <lixiang117423@foxmail.com>
LicenseArtistic-2.0
Version0.2.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("lixiang117423/ggmotif")
lixiang117423/ggmotif documentation built on Aug. 14, 2022, 5:32 a.m.