Man pages for machalen/QualityGraphsOligo
Make quality graphs for microarray data based on objects obtained with oligo normalization.
| boxplotAll_oligo | BoxPlots for quality control |
| BoxplotNorm_oligo | Function to make boxplots with microarray normalized data. |
| BoxplotRaw_oligo | Function to make a boxplot with raw intensity microarray data... |
| clusterdend | Clusters for normalized microarray data |
| densityplotAll_oligo | Density plots for microarrays |
| densityplot_oligo | Function to make density plots with raw microarray data in... |
| makePCA | 3D Plot with Principal Component Analysis (PCA) |
| many.clusters_V | Function to make many clusters with different methods and... |
| QualityGraphsOligo-package | Make quality graphs for microarray data based on objects... |
| qualityplots_oligo | Make different plots for microarray quality assessment. |
| RLE_NUSE_oligo | Function to make NUSE and RLE boxplots. |
| setparam | Function to get the parameters for the plots based on sample... |
