machiela-lab/PCAmatchR: Match Cases to Controls Based on Genotype Principal Components
Matches cases to controls based on genotype principal components (PC). In order to produce better results, matches are based on the weighted distance of PCs where the weights are equal to the % variance explained by that PC. A weighted Mahalanobis distance metric (Kidd et al. (1987) <DOI:10.1016/0031-3203(87)90066-5>) is used to determine matches.
Getting started
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Package details |
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| Maintainer | Derek W. Brown <derek9@gwmail.gwu.edu> |
| License | MIT + file LICENSE |
| Version | 0.3.3 |
| URL | https://github.com/machiela-lab/PCAmatchR |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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