API for mairenileath/PLTimeR
What the Package Does (One Line, Title Case)
| Global functions | |
|---|---|
| CNA_annotation | Source code |
| buildUniquePlaceTree | Source code |
| clusterGenerateDistanceSummary | Source code |
| clusterVisualizeAndGroup | Source code |
| cna_count_summary | Source code |
| comparison_heatmap | Source code |
| confused_matrix | Source code |
| conga | Source code |
| createNode | Source code |
| fdr_summary | Source code |
| feature_name_prettify | Source code |
| getNodeEdgeInventory | Source code |
| get_cna | Source code |
| get_unique_cna_count | Source code |
| identify_enriched_regions | Source code |
| identify_enriched_regions_gain | Source code |
| identify_enriched_regions_hd | Source code |
| identify_enriched_regions_loh | Source code |
| merge_enriched_regions | Source code |
| multipcf_new_breakpoints | Source code |
| order_events_across_chort | Source code |
| plot_CN_landscape | Source code |
| plot_arbs_bars | Source code |
| plot_tm_ordering | Source code |
| plot_tm_proportions | Source code |
| prepare_data_for_landscape | Source code |
| remove_artefacts | Source code |
| set_cna_name | Source code |
| set_gene_name | Source code |
| subclone_collation | Source code |
| update_column_names | Source code |
