API for mattg3004/SchistoIndividual
Individual based simulations of schistosomaisis.
| Global functions | |
|---|---|
| add_to_mda | Source code |
| administer_drug | Source code |
| calculate_distances | Source code |
| calculate_likelihood | Source code Source code |
| calculate_likelihood_binned_ages | Source code |
| calculate_likelihood_binned_ages_increasing | Source code |
| calculate_likelihood_grid_parameters | Source code Source code |
| calculate_multinomial_likelihood | Source code |
| calculate_worm_pairs | Source code Source code Source code |
| create_contact_settings | Source code |
| create_mda | Source code |
| create_population_specified_ages | Source code |
| default_pars | Source code |
| doSimsForDistanceCalc | Source code |
| doSimsForMultinomialCounts | Source code |
| doSimsForMultinomialCounts3Datasets | Source code |
| doSimsForPoissonLikelihood3Datasets | Source code |
| doSimsForPoissonLikelihood3DatasetsIncreasing | Source code |
| egg_bins_for_age_group | Source code |
| egg_bins_for_age_group_count | Source code |
| generate_ages_and_deaths | Source code Source code |
| get_dot_mean | Source code |
| initialize_mcmc_pars | Source code |
| load_population_from_file | Source code |
| load_saved_population | Source code |
| make_age_contact_rate_array | Source code |
| mcmc_parameter_step | Source code |
| mcmc_params | Source code |
| mcmc_with_distance_likelihood | Source code |
| mcmc_with_multinomial_counts | Source code |
| mcmc_with_poisson_likelihood | Source code |
| mcmc_with_poisson_likelihood_increasing | Source code |
| plot_data_from_julia | Source code |
| plot_data_from_julia_multiple_records | Source code |
| plot_data_from_julia_sac_adult_all | Source code |
| prevalence_for_each_age_group | Source code |
| refresh_parameters | Source code |
| return_sim_values | Source code Source code |
| revert_mcmc_pars | Source code |
| run_repeated_sims_no_births_deaths | Source code |
| run_repeated_sims_no_population_change | Source code |
| run_repeated_sims_no_population_change_increasing | Source code |
| save_file_in_julia | Source code |
| save_population_to_file | Source code |
| set_pars | Source code |
| store_mcmc_pars | Source code |
| update_contact_rate | Source code Source code |
| update_env_constant_population | Source code |
| update_env_constant_population_increasing | Source code |
| update_env_keep_population_same | Source code |
| update_env_keep_population_same_save_predisposition | Source code |
| update_env_to_equ | Source code |
| update_env_to_equ_no_save | Source code |
| update_mcmc_pars | Source code |
| update_parameters | Source code |
| worm_burden_proportions | Source code |
