Man pages for mattg3004/SchistoxpkgR
| add_to_mda | add to MDA schedule |
| administer_drug | Administer drugs to specified individuals. |
| calculate_worm_pairs | function to calculate the number of worm pairs |
| create_contact_settings | Create contact by age rates given a scenario |
| create_mda | create the MDA |
| create_population_specified_ages | Create the population to begin from |
| default_pars | Return the default parameters defined in the julia package |
| generate_ages_and_deaths | Will age the human population in order to get a realistic age... |
| get_adult_data_from_record | output information for burden and heavy-intensity burden in... |
| get_dot_mean | Calculate the element wise mean of whatever Julia array is... |
| get_pop_data_from_record | output information for burden and heavy-intensity for whole... |
| get_sac_data_from_record | output information for burden and heavy-intensity burden in... |
| get_selected_data | Get all entries of a chosen variable from the Julia humans... |
| make_age_contact_rate_array | Make the contact by age array given the specified inputs |
| parameter_value | Get the value of a chosen parameter |
| run_repeated_sims_no_population_change | run simulations where the population doesn't change |
| run_repeated_sims_no_population_change_human_larvae | run simulations where the population doesn't change. Larvae... |
| run_repeated_sims_no_population_change_increasing | run simulations where the population doesn't change and the... |
| save_population_to_file | Save humans, environmental cercariae and mircacidia to a file... |
| schistox_setup | Setup Schistoxpkg |
| set_pars | Set the parameters to the desired values. |
| update_contact_rate | Update the contact rates for individuals when they age |
| update_env_constant_population | Run the simulation of the population where we include births... |
| update_env_constant_population_human_larvae | Run the simulation of the population where we include births... |
| update_env_constant_population_increasing | Run the simulation of the population where we include births... |
| update_parameters | Update the parameter set used for the simulations This will... |
| update_parameters_individually | update a specific parameter |
| update_specified_parameters | Update a number of specified parameters at the same time |
