API for mauranolab/decal
Differential Expression Analysis of Clonal Alterations Local effects
| Global functions | |
|---|---|
| build_clone_matrix | Source code |
| build_lfc_mat | Source code |
| check_file | Source code |
| coldiv | Source code |
| decal | Man page Source code |
| estimate_dispersion | Man page Source code |
| estimate_theta | Source code |
| estimate_theta_raw | Source code |
| fit_nb | Source code |
| get_index | Source code |
| is_index | Source code |
| is_integer | Source code |
| is_matrix | Source code |
| or | Source code |
| read_cellranger | Man page Source code |
| read_tsv_ | Source code |
| regularize_theta | Source code |
| seq_log | Man page Source code |
| sim_clone | Man page Source code |
| sim_clone_range | Man page Source code |
| sim_count | Man page Source code |
| sim_count_from_data | Man page Source code |
| sim_decal | Man page |
| sim_experiment | Man page Source code |
| sim_experiment_from_data | Man page Source code |
| simulate_clone | Man page |
| simulate_count | Man page |
| simulate_experiment | Man page |
| simulate_perturbations | Source code |
| validate_dataframe | Source code |
| validate_index | Source code |
| validate_matrix | Source code |
| validate_numeric | Source code |
| validate_numeric_scalar | Source code |
| validate_positive_integer | Source code |
| validate_positive_integer_scalar | Source code |
| validate_rate | Source code |
