Man pages for mcomas/usrgi.lib
Tools to tidy and to present results used in research support unit of Girona.
| bp_cat | Blood presure categorization according to REGICOR model |
| ckd.epi | Gromerular filtration rate function |
| ckd.stage | Gromerular filtration rate function |
| coef.incidence | Incidence coefficient |
| colhdl_cat | High density cholesterol categorization according to REGICOR... |
| coltot_cat | Total cholesterol categorization according to REGICOR model |
| create.endpoints | This function converts a given outcome in date format with... |
| create.ep_combinate | Create a combined end-point from different endpoints |
| create.ep_death | Calculate an date event variable for death |
| create.statine_level | Fix the level of statine treatment, using PETREA definition... |
| cuminc.mi | Build a dataframe with the Nelson-Aalen survival estimates |
| filter.bmi | Filter bmi variable eliminating measurements below and above... |
| filter.bp | Filter bp variable eliminating measurements below and above a... |
| filter.cholesterol | Filter liidic variables (coltot, colhdl, colldl, tg) |
| filter.height | Filter height variable eliminating measurements below and... |
| filter.variable | Filter a variable eliminating measurements below and above a... |
| filter.weight | Filter weight variable eliminating measurements below and... |
| fit_cox.mi | ifelse when used with Dates |
| fit_coxph.mi | fit a cox model to multiple imputated data |
| format_variables | Format variables |
| get_icd | Returns the icd code for a disease |
| ifelse.Date | fitting a cox model to a multiple imputation dataset |
| incidence | Desnity incidence coefficient |
| print.incidence | Incidence summary |
| recover.alcoholism | Recover alcoholism |
| recover.bmi | Recover bmi variable from height and weight |
| recover.cholesterol | Recover cholesterols (only if tg < 400) |
| recover.obesity | Recover obesity from BMI calculation |
| recover.smoking | Recover smoking |
| recover.using_medication | Recover alcoholism |
| regicor | Cardiovascular risk calculation according to REGICOR model |
| vcov.incidence | Incidence coefficient |
