Files in mi-erasmusmc/CovCoagEmaValidation
CovCoagEmaValidation
.Rbuildignore
.gitignore
CovCoagEmaValidation.Rproj
DESCRIPTION
HydraConfig.json
NAMESPACE
R/AgeCovariateCode.R
R/CohortCovariateCode.R
R/CovCoagEmaValidation.R
R/MeasurementCohortCovariateCode.R
R/MeasurementCovariateCode.R
R/PackageResults.R
R/extraPredictFunctions.R
R/getCovariateSettings.R
R/helpers.R
R/loadModelFromJson.R
R/main.R
R/runModelsFromJson.R
R/stratifiedValidation.R
README.md
extras/PackageMaintenance.R
extras/codeToRun.R
extras/createLockfiles.R
inst/cohorts/Antiinflammatory.json
inst/cohorts/Antineoplastic_immunomodulating.json
inst/cohorts/Antiphospholipid_syndrome.json
inst/cohorts/Antithrombotic_agent.json
inst/cohorts/Asthma.json
inst/cohorts/Atrial_fibrillation.json
inst/cohorts/Autoimmune_disease.json
inst/cohorts/Chronic_obstructive_lung_disease.json
inst/cohorts/Corticosteroids.json
inst/cohorts/Coxib.json
inst/cohorts/DTH.json
inst/cohorts/DVT_narrow.json
inst/cohorts/Dementia.json
inst/cohorts/Diabetes_mellitus.json
inst/cohorts/Heart_disease.json
inst/cohorts/Hormonal_contraceptives.json
inst/cohorts/Hypertensive_disorder.json
inst/cohorts/Lipid_modifying_agent.json
inst/cohorts/MI.json
inst/cohorts/MI_or_IS.json
inst/cohorts/Malignant_neoplastic_disease.json
inst/cohorts/Obesity.json
inst/cohorts/PE.json
inst/cohorts/Renal_impairment.json
inst/cohorts/STR.json
inst/cohorts/Sex_hormones_modulators.json
inst/cohorts/Tamoxifen.json
inst/cohorts/Target.json
inst/cohorts/Thrombophilia.json
inst/cohorts/VTE_narrow.json
inst/doc/UsingSkeletonPredictionValidationPackage.pdf
inst/models/Analysis_1/covariateMap.csv
inst/models/Analysis_1/model.json
inst/models/Analysis_1/varImp.csv
inst/models/Analysis_11/covariateMap.csv
inst/models/Analysis_11/model.json
inst/models/Analysis_11/varImp.csv
inst/models/Analysis_12/covariateMap.csv
inst/models/Analysis_12/model.json
inst/models/Analysis_12/varImp.csv
inst/models/Analysis_13/covariateMap.csv
inst/models/Analysis_13/model.json
inst/models/Analysis_13/varImp.csv
inst/models/Analysis_14/covariateMap.csv
inst/models/Analysis_14/model.json
inst/models/Analysis_14/varImp.csv
inst/models/Analysis_15/covariateMap.csv
inst/models/Analysis_15/model.json
inst/models/Analysis_15/varImp.csv
inst/models/Analysis_16/covariateMap.csv
inst/models/Analysis_16/model.json
inst/models/Analysis_16/varImp.csv
inst/models/Analysis_17/covariateMap.csv
inst/models/Analysis_17/model.json
inst/models/Analysis_17/varImp.csv
inst/models/Analysis_19/covariateMap.csv
inst/models/Analysis_19/model.json
inst/models/Analysis_19/varImp.csv
inst/models/Analysis_20/covariateMap.csv
inst/models/Analysis_20/model.json
inst/models/Analysis_20/varImp.csv
inst/models/Analysis_21/covariateMap.csv
inst/models/Analysis_21/model.json
inst/models/Analysis_21/varImp.csv
inst/models/Analysis_22/covariateMap.csv
inst/models/Analysis_22/model.json
inst/models/Analysis_22/varImp.csv
inst/models/Analysis_23/covariateMap.csv
inst/models/Analysis_23/model.json
inst/models/Analysis_23/varImp.csv
inst/models/Analysis_24/covariateMap.csv
inst/models/Analysis_24/model.json
inst/models/Analysis_24/varImp.csv
inst/models/Analysis_3/covariateMap.csv
inst/models/Analysis_3/model.json
inst/models/Analysis_3/varImp.csv
inst/models/Analysis_4/covariateMap.csv
inst/models/Analysis_4/model.json
inst/models/Analysis_4/varImp.csv
inst/models/Analysis_5/covariateMap.csv
inst/models/Analysis_5/model.json
inst/models/Analysis_5/varImp.csv
inst/models/Analysis_6/covariateMap.csv
inst/models/Analysis_6/model.json
inst/models/Analysis_6/varImp.csv
inst/models/Analysis_7/covariateMap.csv
inst/models/Analysis_7/model.json
inst/models/Analysis_7/varImp.csv
inst/models/Analysis_8/covariateMap.csv
inst/models/Analysis_8/model.json
inst/models/Analysis_8/varImp.csv
inst/models/Analysis_9/covariateMap.csv
inst/models/Analysis_9/model.json
inst/models/Analysis_9/varImp.csv
inst/settings/CohortsToCreate.csv
inst/settings/plpAnalysisList.json
inst/sql/sql_server/Antiinflammatory.sql
inst/sql/sql_server/Antineoplastic_immunomodulating.sql
inst/sql/sql_server/Antiphospholipid_syndrome.sql
inst/sql/sql_server/Antithrombotic_agent.sql
inst/sql/sql_server/Asthma.sql
inst/sql/sql_server/Atrial_fibrillation.sql
inst/sql/sql_server/Autoimmune_disease.sql
inst/sql/sql_server/Chronic_obstructive_lung_disease.sql
inst/sql/sql_server/Corticosteroids.sql
inst/sql/sql_server/Coxib.sql
inst/sql/sql_server/CreateCohortTable.sql
inst/sql/sql_server/DTH.sql
inst/sql/sql_server/DVT_narrow.sql
inst/sql/sql_server/Dementia.sql
inst/sql/sql_server/Diabetes_mellitus.sql
inst/sql/sql_server/GetCounts.sql
inst/sql/sql_server/Heart_disease.sql
inst/sql/sql_server/Hormonal_contraceptives.sql
inst/sql/sql_server/Hypertensive_disorder.sql
inst/sql/sql_server/Lipid_modifying_agent.sql
inst/sql/sql_server/MI.sql
inst/sql/sql_server/MI_or_IS.sql
inst/sql/sql_server/Malignant_neoplastic_disease.sql
inst/sql/sql_server/Obesity.sql
inst/sql/sql_server/PE.sql
inst/sql/sql_server/Renal_impairment.sql
inst/sql/sql_server/STR.sql
inst/sql/sql_server/Sex_hormones_modulators.sql
inst/sql/sql_server/Tamoxifen.sql
inst/sql/sql_server/Target.sql
inst/sql/sql_server/Thrombophilia.sql
inst/sql/sql_server/VTE_narrow.sql
man/CovCoagEmaValidation.Rd
man/addEvaluation.Rd
man/checkInstall.Rd
man/createCohorts.Rd
man/execute.Rd
man/getAgeCovariateData.Rd
man/getCohortCovariateData.Rd
man/getMeasurementCohortCovariateData.Rd
man/getMeasurementCovariateData.Rd
man/getTable1.Rd
man/packageResults.Rd
man/predict.nonPlpGlm.Rd
man/predict.pythonJson.Rd
man/stratifiedValidation.Rd
man/transportPlpModels.Rd
pyEnvironment.yml
renv.lock
vignettes/UsingSkeletonPredictionValidationPackage.rmd
